SEED Subsystem: tRNA processing in Pseudomonas putida KT2440

Experiments:

Role Gene Name  
5-carboxymethyl uridine and 5-carboxymethyl 2-thiouridine methyltransferase No genes
Ribonuclease BN (EC 3.1.-.-) No genes
Ribonuclease D (EC 3.1.26.3) PP_4591
Ribonuclease P protein component (EC 3.1.26.5) PP_0008
Ribonuclease PH (EC 2.7.7.56) PP_5294
Ribonuclease T (EC 3.1.13.-) PP_1085
Ribonuclease Z (EC 3.1.26.11) PP_4033
tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) No genes
tRNA pseudouridine 13 synthase (EC 4.2.1.-) PP_1619
tRNA pseudouridine 55 synthase (EC 4.2.1.70) No genes
tRNA pseudouridine synthase A (EC 4.2.1.70) PP_1191
  PP_1994
tRNA pseudouridine synthase B (EC 4.2.1.70) PP_4710
tRNA(Ile)-lysidine synthetase No genes
tRNA-i(6)A37 methylthiotransferase No genes
tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) PP_1035
tRNAHis-5'-guanylyltransferase No genes

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