SEED Subsystem: Pyrimidine utilization in Pseudomonas putida KT2440

Experiments:

Role Gene Name  
Beta-ureidopropionase (EC 3.5.1.6) PP_4034
Dihydropyrimidinase (EC 3.5.2.2) PP_4036
Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2) PP_4038
Possible hydrolase or acyltransferase RutD in novel pyrimidine catabolism pathway No genes
Possible pyrimidine permease in reductive pathway PP_4035
Possible ring-opening amidohydrolase RutC in novel pyrimidine catabolism pathway No genes
Predicted amidohydrolase RutB in novel pyrimidine catabolism pathway No genes
Predicted flavin reductase RutF in novel pyrimidine catabolism pathway No genes
Predicted monooxygenase RutA in novel pyrimidine catabolism pathway No genes
Predicted reductase RutE in novel pyrimidine catabolism pathway No genes
Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism PP_4037
Pyrimidine ABC transporter, ATP-binding protein No genes
Pyrimidine ABC transporter, substrate-binding component No genes
Pyrimidine ABC transporter, transmembrane component 1 No genes
Pyrimidine ABC transporter, transmembrane component 2 No genes
Transcriptional regulator RutR of pyrimidine catabolism (TetR family) PP_0594
  PP_4039
Uracil permease PP_0745

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Or view this subsystem at the SEED (slow)