SEED Subsystem: Polyhydroxybutyrate metabolism in Pseudomonas putida KT2440

Experiments:

Role Gene Name  
3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) PP_2047
  PP_2136
3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) No genes
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) PP_3755
3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) PP_2047
  PP_2136
3-ketoacyl-CoA thiolase (EC 2.3.1.16) PP_3355
Acetoacetyl-CoA reductase (EC 1.1.1.36) No genes
Acetoacetyl-CoA synthetase (EC 6.2.1.16) PP_3071
  PP_3458
Acetyl-CoA acetyltransferase (EC 2.3.1.9) PP_4636
Butyrate-acetoacetate CoA-transferase subunit A (EC 2.8.3.9) No genes
Butyrate-acetoacetate CoA-transferase subunit B (EC 2.8.3.9) No genes
D(-)-3-hydroxybutyrate oligomer hydrolase (EC 3.1.1.22) No genes
D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) PP_2784
  PP_3073
D-beta-hydroxybutyrate permease PP_3074
Enoyl-CoA hydratase (EC 4.2.1.17) PP_1412
  PP_2047
  PP_2136
  PP_3726
  PP_3732
Intracellular PHB depolymerase (EC 3.1.1.-) No genes
Poly(3-hydroxyalkanoate) depolymerase PP_5004
Polyhydroxyalkanoate granule-associated protein PhaF PP_5007
Polyhydroxyalkanoic acid synthase PP_5003
  PP_5005
Putative 3-hydroxyacyl-coa dehydrogenase No genes
Short chain fatty acids transporter PP_3124
polyhydroxyalkanoate granule-associated protein PhaI PP_5008
polyhydroxyalkanoate synthesis repressor PhaR No genes

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