SEED Subsystem: DNA repair, bacterial in Pseudomonas putida KT2440

Role	Gene	Name
A/G-specific adenine glycosylase (EC 3.2.2.-)	PP_0286
	PP_0287
ADA regulatory protein	PP_0706
Alkylated DNA repair protein AlkB	PP_3400
DNA mismatch repair endonuclease MutH	No genes
DNA polymerase IV (EC 2.7.7.7)	PP_1203
DNA polymerase-like protein MT3142	No genes
DNA polymerase-like protein PA0670	No genes
DNA recombination protein RmuC	PP_1694
DNA recombination-dependent growth factor C	PP_1702
DNA repair exonuclease family protein YhaO	No genes
DNA repair protein RadA	PP_4644
DNA repair protein RadC	PP_2493
	PP_5284
DNA repair protein RecN	PP_4729
DNA-damage-inducible protein I	No genes
DNA-damage-inducible protein J	No genes
Endonuclease IV (EC 3.1.21.2)	No genes
Endonuclease V (EC 3.1.21.7)	No genes
Exodeoxyribonuclease III (EC 3.1.11.2)	PP_2707
	PP_2890
	PP_5292
Exodeoxyribonuclease VII large subunit (EC 3.1.11.6)	PP_1027
Exodeoxyribonuclease VII small subunit (EC 3.1.11.6)	PP_0529
Exonuclease SbcC	PP_2024
Exonuclease SbcD	PP_2025
G:T/U mismatch-specific uracil/thymine DNA-glycosylase	No genes
Methyl-directed repair DNA adenine methylase (EC 2.1.1.72)	No genes
Methylated-DNA--protein-cysteine methyltransferase (EC 2.1.1.63)	PP_0706
	PP_3017
RecA protein	PP_1629
Recombinational DNA repair protein RecT (prophage associated)	No genes
SOS-response repressor and protease LexA (EC 3.4.21.88)	PP_2143
	PP_3116
Single-stranded DNA-binding protein	PP_0485
Very-short-patch mismatch repair endonuclease (G-T specific)	No genes