SEED Subsystem: DNA-replication in Pseudomonas putida KT2440

Experiments:

Role Gene Name  
ATP-dependent DNA helicase RecG (EC 3.6.1.-) PP_5310
ATP-dependent DNA helicase RecQ PP_4516
Arrested fork binding No genes
Chromosomal replication initiator protein DnaA PP_0010
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) PP_1215
DNA polymerase I (EC 2.7.7.7) PP_0123
DNA polymerase II (EC 2.7.7.7) PP_2393
DNA polymerase III alpha subunit (EC 2.7.7.7) PP_1606
  PP_4768
DNA polymerase III beta subunit (EC 2.7.7.7) PP_0011
DNA polymerase III chi subunit (EC 2.7.7.7) PP_0979
DNA polymerase III delta prime subunit (EC 2.7.7.7) PP_1966
DNA polymerase III delta subunit (EC 2.7.7.7) PP_4796
DNA polymerase III epsilon subunit (EC 2.7.7.7) PP_0353
  PP_4141
DNA polymerase III psi subunit (EC 2.7.7.7) No genes
DNA polymerase III subunits gamma and tau (EC 2.7.7.7) PP_4269
DNA polymerase III theta subunit (EC 2.7.7.7) No genes
DNA primase (EC 2.7.7.-) PP_0388
DNA primase (EC 2.7.7.-), phage-associated No genes
DNA primase TraC (EC 2.7.7.-) No genes
DNA repair protein RecN PP_4729
DNA replication protein DnaC No genes
DNA replication terminus site-binding protein No genes
Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) PP_4672
Exodeoxyribonuclease V beta chain (EC 3.1.11.5) PP_4673
Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) PP_4674
Helicase PriA essential for oriC/DnaA-independent DNA replication PP_5088
Helicase loader DnaI No genes
Holliday junction DNA helicase RuvA PP_1216
Holliday junction DNA helicase RuvB PP_1217
Primosomal protein I No genes
Primosomal replication protein N No genes
Primosomal replication protein N prime prime No genes
RecA protein PP_1629
Recombination protein RecR PP_4267
Replicative DNA helicase (EC 3.6.1.-) PP_3893
  PP_4873
Replicative DNA helicase (EC 3.6.1.-) [SA14-24] No genes
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) PP_1477
Transcription-repair coupling factor PP_2148

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