SEED Subsystem: DNA-replication in Pseudomonas sp. SVBP6

Experiments:

Role Gene Name  
ATP-dependent DNA helicase RecG (EC 3.6.1.-) COO64_RS01595 recG
ATP-dependent DNA helicase RecQ COO64_RS21845 recQ
Arrested fork binding No genes
Chromosomal replication initiator protein DnaA COO64_RS02110 dnaA
  COO64_RS07280 hda
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) COO64_RS20090 ruvC
DNA polymerase I (EC 2.7.7.7) COO64_RS02475 polA
DNA polymerase II (EC 2.7.7.7) COO64_RS07850
DNA polymerase III alpha subunit (EC 2.7.7.7) COO64_RS07700
  COO64_RS15410
  COO64_RS19715 dnaE
DNA polymerase III beta subunit (EC 2.7.7.7) COO64_RS02115 dnaN
DNA polymerase III chi subunit (EC 2.7.7.7) COO64_RS04410
DNA polymerase III delta prime subunit (EC 2.7.7.7) COO64_RS05775
DNA polymerase III delta subunit (EC 2.7.7.7) COO64_RS15555 holA
DNA polymerase III epsilon subunit (EC 2.7.7.7) COO64_RS19265 dnaQ
  COO64_RS22775
DNA polymerase III psi subunit (EC 2.7.7.7) No genes
DNA polymerase III subunits gamma and tau (EC 2.7.7.7) COO64_RS18595 dnaX
DNA polymerase III theta subunit (EC 2.7.7.7) No genes
DNA primase (EC 2.7.7.-) COO64_RS22575 dnaG
DNA primase (EC 2.7.7.-), phage-associated No genes
DNA primase TraC (EC 2.7.7.-) No genes
DNA repair protein RecN COO64_RS15270 recN
DNA replication protein DnaC No genes
DNA replication terminus site-binding protein No genes
Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) COO64_RS02685 recD
Exodeoxyribonuclease V beta chain (EC 3.1.11.5) COO64_RS02680 recB
Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) COO64_RS02675 recC
Helicase PriA essential for oriC/DnaA-independent DNA replication COO64_RS13030
Helicase loader DnaI No genes
Holliday junction DNA helicase RuvA COO64_RS20095 ruvA
Holliday junction DNA helicase RuvB COO64_RS20100 ruvB
Primosomal protein I COO64_RS27360
Primosomal replication protein N No genes
Primosomal replication protein N prime prime No genes
RecA protein COO64_RS19930 recA
Recombination protein RecR COO64_RS18630 recR
Replicative DNA helicase (EC 3.6.1.-) COO64_RS17985 dnaB
  COO64_RS20370
Replicative DNA helicase (EC 3.6.1.-) [SA14-24] No genes
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) COO64_RS04980 recJ
Transcription-repair coupling factor COO64_RS09460 mfd

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