SEED Subsystem: tRNA processing in Pseudomonas sp. S08-1

Experiments:

Role Gene Name  
5-carboxymethyl uridine and 5-carboxymethyl 2-thiouridine methyltransferase No genes
Ribonuclease BN (EC 3.1.-.-) OH686_07230
  OH686_19035
Ribonuclease D (EC 3.1.26.3) OH686_05315
Ribonuclease P protein component (EC 3.1.26.5) OH686_12640
Ribonuclease PH (EC 2.7.7.56) OH686_13570
Ribonuclease T (EC 3.1.13.-) OH686_03945
Ribonuclease Z (EC 3.1.26.11) No genes
tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) No genes
tRNA pseudouridine 13 synthase (EC 4.2.1.-) OH686_18165
tRNA pseudouridine 55 synthase (EC 4.2.1.70) No genes
tRNA pseudouridine synthase A (EC 4.2.1.70) OH686_04450
  OH686_05400
tRNA pseudouridine synthase B (EC 4.2.1.70) OH686_17155
tRNA(Ile)-lysidine synthetase No genes
tRNA-i(6)A37 methylthiotransferase OH686_09215
tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) OH686_17620
tRNAHis-5'-guanylyltransferase No genes

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