SEED Subsystem: tRNA processing in Pseudomonas protegens RBAN4

Experiments:

Role Gene Name  
5-carboxymethyl uridine and 5-carboxymethyl 2-thiouridine methyltransferase No genes
Ribonuclease BN (EC 3.1.-.-) No genes
Ribonuclease D (EC 3.1.26.3) FABNJH_07800 rnd
Ribonuclease P protein component (EC 3.1.26.5) FABNJH_31440 rnpA
Ribonuclease PH (EC 2.7.7.56) FABNJH_30565 rph
Ribonuclease T (EC 3.1.13.-) FABNJH_24555 rnt
Ribonuclease Z (EC 3.1.26.11) No genes
tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) No genes
tRNA pseudouridine 13 synthase (EC 4.2.1.-) FABNJH_06215 truD
tRNA pseudouridine 55 synthase (EC 4.2.1.70) No genes
tRNA pseudouridine synthase A (EC 4.2.1.70) FABNJH_06515
  FABNJH_10810 truA
tRNA pseudouridine synthase B (EC 4.2.1.70) FABNJH_04400 truB
tRNA(Ile)-lysidine synthetase No genes
tRNA-i(6)A37 methylthiotransferase FABNJH_27430 miaB
tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) FABNJH_24920 tadA
tRNAHis-5'-guanylyltransferase No genes

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