SEED Subsystem: Pyrimidine utilization in Pseudomonas protegens RBAN4

Experiments:

Role Gene Name  
Beta-ureidopropionase (EC 3.5.1.6) FABNJH_13320
Dihydropyrimidinase (EC 3.5.2.2) FABNJH_13310 hydA
Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2) FABNJH_13300 preA
Possible hydrolase or acyltransferase RutD in novel pyrimidine catabolism pathway No genes
Possible pyrimidine permease in reductive pathway FABNJH_13315 pucI
Possible ring-opening amidohydrolase RutC in novel pyrimidine catabolism pathway No genes
Predicted amidohydrolase RutB in novel pyrimidine catabolism pathway No genes
Predicted flavin reductase RutF in novel pyrimidine catabolism pathway No genes
Predicted monooxygenase RutA in novel pyrimidine catabolism pathway No genes
Predicted reductase RutE in novel pyrimidine catabolism pathway No genes
Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism FABNJH_13305 gltD
Pyrimidine ABC transporter, ATP-binding protein No genes
Pyrimidine ABC transporter, substrate-binding component No genes
Pyrimidine ABC transporter, transmembrane component 1 No genes
Pyrimidine ABC transporter, transmembrane component 2 No genes
Transcriptional regulator RutR of pyrimidine catabolism (TetR family) FABNJH_03780
  FABNJH_13295
Uracil permease FABNJH_25870 uraA

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Or view this subsystem at the SEED (slow)