SEED Subsystem: DNA-replication in Pseudomonas sp. DMC3

Experiments:

Role Gene Name  
ATP-dependent DNA helicase RecG (EC 3.6.1.-) GFF427
ATP-dependent DNA helicase RecQ GFF2380
Arrested fork binding No genes
Chromosomal replication initiator protein DnaA GFF2542
  GFF576
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) GFF5186
DNA polymerase I (EC 2.7.7.7) GFF631
DNA polymerase II (EC 2.7.7.7) GFF1404
DNA polymerase III alpha subunit (EC 2.7.7.7) GFF2068
  GFF3715
  GFF3922
DNA polymerase III beta subunit (EC 2.7.7.7) GFF577
DNA polymerase III chi subunit (EC 2.7.7.7) GFF1951
DNA polymerase III delta prime subunit (EC 2.7.7.7) GFF4751
DNA polymerase III delta subunit (EC 2.7.7.7) GFF3891
DNA polymerase III epsilon subunit (EC 2.7.7.7) GFF1025
  GFF86
DNA polymerase III psi subunit (EC 2.7.7.7) No genes
DNA polymerase III subunits gamma and tau (EC 2.7.7.7) GFF705
DNA polymerase III theta subunit (EC 2.7.7.7) No genes
DNA primase (EC 2.7.7.-) GFF50
DNA primase (EC 2.7.7.-), phage-associated GFF4138
DNA primase TraC (EC 2.7.7.-) No genes
DNA repair protein RecN GFF4971
DNA replication protein DnaC No genes
DNA replication terminus site-binding protein No genes
Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) GFF4914
Exodeoxyribonuclease V beta chain (EC 3.1.11.5) GFF4913
Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) GFF4912
Helicase PriA essential for oriC/DnaA-independent DNA replication GFF3089
Helicase loader DnaI No genes
Holliday junction DNA helicase RuvA GFF5185
Holliday junction DNA helicase RuvB GFF5184
Primosomal protein I GFF837
Primosomal replication protein N No genes
Primosomal replication protein N prime prime No genes
RecA protein GFF2111
Recombination protein RecR GFF708
Replicative DNA helicase (EC 3.6.1.-) GFF3235
Replicative DNA helicase (EC 3.6.1.-) [SA14-24] No genes
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) GFF1996
Transcription-repair coupling factor GFF1285

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