SEED Subsystem: Polyamine Metabolism in Paraburkholderia sabiae LMG 24235

Experiments:

Role Gene Name  
4-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) No genes
5'-methylthioadenosine nucleosidase (EC 3.2.2.16) No genes
ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) QEN71_RS09380
  QEN71_RS09825
  QEN71_RS11240
  QEN71_RS17365
  QEN71_RS31985
  QEN71_RS39245
Agmatinase (EC 3.5.3.11) QEN71_RS03400
  QEN71_RS05095
  QEN71_RS11320
Agmatine deiminase (EC 3.5.3.12) No genes
Agmatine/putrescine antiporter, associated with agmatine catabolism No genes
Arginine decarboxylase (EC 4.1.1.19) No genes
Arginine decarboxylase, catabolic (EC 4.1.1.19) No genes
Arginine/agmatine antiporter No genes
Arginine/ornithine antiporter No genes
Arginine/ornithine antiporter ArcD No genes
Biosynthetic arginine decarboxylase (EC 4.1.1.19) No genes
Carbamate kinase (EC 2.7.2.2) QEN71_RS33045
Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-) No genes
Carboxynorspermidine dehydrogenase, putative (EC 1.1.1.-) No genes
DNA-binding response regulator, LuxR family, near polyamine transporter QEN71_RS17415
  QEN71_RS32080
  QEN71_RS42425
N-carbamoylputrescine amidase (3.5.1.53) No genes
Ornithine decarboxylase (EC 4.1.1.17) QEN71_RS33025
Predicted chaperone lipoprotein YacC, potentially involved in protein secretion No genes
Predicted polyamine sensor NspS, involved in biofilm formation No genes
Probable spermidine/putrescine substrate binding protein in Mollicutes No genes
Probable two-component sensor, near polyamine transporter No genes
Putative GntR-family regulatory protein and aminotransferase near polyamine transporter QEN71_RS17355
  QEN71_RS39160
Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) QEN71_RS07120
  QEN71_RS12945
Putrescine carbamoyltransferase (EC 2.1.3.6) No genes
Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) QEN71_RS09395
  QEN71_RS11235
  QEN71_RS17360
  QEN71_RS31940
  QEN71_RS36445
  QEN71_RS39240
  QEN71_RS41240
Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) QEN71_RS07125
  QEN71_RS12950
Putrescine transport system permease protein PotH (TC 3.A.1.11.2) QEN71_RS07130
  QEN71_RS12955
  QEN71_RS31600
Putrescine transport system permease protein PotI (TC 3.A.1.11.2) QEN71_RS07135
  QEN71_RS12960
Putrescine-ornithine antiporter No genes
Putrescine/proton symporter, putrescine/ornithine antiporter PotE QEN71_RS33020
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), eukaryotic No genes
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1A No genes
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1B No genes
Spermidine N1-acetyltransferase (EC 2.3.1.57) No genes
Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) QEN71_RS11245
  QEN71_RS17370
  QEN71_RS31955
  QEN71_RS36440
  QEN71_RS39235
  QEN71_RS41245
Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) QEN71_RS11250
  QEN71_RS17375
  QEN71_RS36435
Spermidine synthase (EC 2.5.1.16) QEN71_RS24620
  QEN71_RS32990
Transcriptional regulator of catabolic arginine decarboxylase (adiA) No genes
Transcriptional regulator, MerR family, near polyamine transporter No genes
Transcriptional regulator, TetR family, associated with agmatine catabolism No genes
Transcriptional regulator, luxR family, associated with agmatine catabolism No genes

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