SEED Subsystem: Nitrate and nitrite ammonification in Paraburkholderia sabiae LMG 24235

Experiments:

Role Gene Name  
Assimilatory nitrate reductase large subunit (EC:1.7.99.4) QEN71_RS37800
Cytochrome c nitrite reductase, small subunit NrfH No genes
Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly No genes
Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly No genes
Cytochrome c-type heme lyase subunit nrfG, nitrite reductase complex assembly No genes
Cytochrome c-type protein NapC No genes
Cytochrome c-type protein NrfB precursor No genes
Cytochrome c552 precursor (EC 1.7.2.2) No genes
Ferredoxin--nitrite reductase (EC 1.7.7.1) No genes
Ferredoxin-type protein NapF (periplasmic nitrate reductase) No genes
Ferredoxin-type protein NapG (periplasmic nitrate reductase) No genes
Nitrate ABC transporter, ATP-binding protein No genes
Nitrate ABC transporter, nitrate-binding protein QEN71_RS12555
Nitrate ABC transporter, permease protein No genes
Nitrate reductase cytochrome c550-type subunit No genes
Nitrate/nitrite response regulator protein QEN71_RS33915
  QEN71_RS34135
Nitrate/nitrite sensor protein (EC 2.7.3.-) QEN71_RS34195
Nitrate/nitrite transporter QEN71_RS10450
  QEN71_RS11600
  QEN71_RS12645
  QEN71_RS15850
  QEN71_RS24935
  QEN71_RS25845
  QEN71_RS30530
  QEN71_RS31040
  QEN71_RS31195
  QEN71_RS34355
  QEN71_RS34370
  QEN71_RS36010
  QEN71_RS37815
  QEN71_RS37835
  QEN71_RS38390
  QEN71_RS39525
  QEN71_RS41395
  QEN71_RS41450
Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) QEN71_RS37810
Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) QEN71_RS37805
Nitrite reductase probable [NAD(P)H] subunit (EC 1.7.1.4) No genes
Nitrite reductase probable electron transfer 4Fe-S subunit (EC 1.7.1.4) No genes
Nitrite transporter NirC No genes
Nitrite transporter from formate/nitrite family No genes
NrfC protein No genes
NrfD protein No genes
Periplasmic nitrate reductase component NapD No genes
Periplasmic nitrate reductase component NapE No genes
Periplasmic nitrate reductase component NapL No genes
Periplasmic nitrate reductase precursor (EC 1.7.99.4) No genes
Polyferredoxin NapH (periplasmic nitrate reductase) No genes
Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly No genes
Respiratory nitrate reductase alpha chain (EC 1.7.99.4) QEN71_RS10425
Respiratory nitrate reductase beta chain (EC 1.7.99.4) QEN71_RS10430
Respiratory nitrate reductase delta chain (EC 1.7.99.4) QEN71_RS10435
Respiratory nitrate reductase gamma chain (EC 1.7.99.4) QEN71_RS10440
Respiratory nitrate reductase subunit, conjectural (EC 1.7.99.4) No genes
Response regulator NasT QEN71_RS12550

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