SEED Subsystem: Experimental tye in Paraburkholderia sabiae LMG 24235

Experiments:

Role Gene Name  
2H phosphoesterase superfamily protein Bsu1186 (yjcG) No genes
5-aminolevulinate synthase (EC 2.3.1.37) No genes
Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases, YtcI homolog No genes
Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) QEN71_RS24405
Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) QEN71_RS03200
Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22), divergent, putative No genes
Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22), divergent, putative 2 No genes
Cytochrome c-type biogenesis protein CcdA (DsbD analog) No genes
Cytochrome c-type biogenesis protein CcsA/ResC QEN71_RS28095
DUF1801 domain-containing protein QEN71_RS09615
Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) QEN71_RS26520
GNAT family acetyltransferase YjcF No genes
Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) QEN71_RS03305
  QEN71_RS35340
Glutamyl-tRNA reductase (EC 1.2.1.70) QEN71_RS27665
HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase No genes
Homolog of E. coli HemY protein No genes
Hypothetical membrane protein, possible involvement in cytochrome functioning/assembly No genes
Hypothetical protein Q, similar to Chlorite dismutase No genes
Hypothetical protein SAV1831 No genes
Hypothetical protein SAV1869 No genes
Hypothetical protein, ydbS homolog No genes
Hypothetical protein, ydbT homolog No genes
Hypothetical, related to broad specificity phosphatases COG0406 QEN71_RS26805
Methyltransferase (EC 2.1.1.-) colocalized with Q No genes
Periplasmic/membrane protein associated with DUF414 No genes
Porphobilinogen deaminase (EC 2.5.1.61) QEN71_RS24950
Porphobilinogen synthase (EC 4.2.1.24) QEN71_RS28115
Possibly related to ydbT No genes
Precorrin-2 oxidase (EC 1.3.1.76) No genes
Protein of unknown function DUF414 No genes
Protoporphyrinogen IX oxidase, aerobic (EC 1.3.3.4) No genes
Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) No genes
Putative acetyl esterase YjcH (EC 3.1.1.-) No genes
Putative lipoprotein SAV1865 No genes
Putative membrane protein Q2 colocalized with Q No genes
Putative nitroreductase family protein SACOL0874 No genes
Putative oxidoreductase ferredoxin-type protein, clusters with CPO No genes
Ribonuclease D (EC 3.1.26.3) No genes
Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) QEN71_RS25220
Sirohydrochlorin ferrochelatase (EC 4.99.1.4) No genes
Small hypothetical protein Hyp1 No genes
Sua5 YciO YrdC YwlC family protein No genes
Uncharacterized SAV1743 homolog No genes
Uncharacterized protein Q1 colocalized with Q No genes
Uncharacterized protein UPF0344 No genes
Uncharacterized protein, homolog of B.subtilis yhgC No genes
Uroporphyrinogen III decarboxylase (EC 4.1.1.37) QEN71_RS29265
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) QEN71_RS08705
  QEN71_RS13600
  QEN71_RS25230
Uroporphyrinogen-III synthase (EC 4.2.1.75) QEN71_RS24945
Uroporphyrinogen-III synthase, divergent, Flavobacterial type (EC 4.2.1.75) No genes
Uroporphyrinogen-III synthase, divergent, Francisella type (EC 4.2.1.75) No genes
transmembrane protein, distant homology with ydbS No genes
transmembrane protein, distant homology with ydbT No genes

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