SEED Subsystem: Coenzyme B12 biosynthesis in Paraburkholderia sabiae LMG 24235

Experiments:

Role Gene Name  
5,6-dimethylbenzimidazole synthase, flavin destructase family No genes
ATPase component CbiO of energizing module of cobalt ECF transporter No genes
Additional lipoprotein component of predicted cobalamin ECF transporter No genes
Additional substrate-specific component CbiN of cobalt ECF transporter No genes
Adenosylcobinamide amidohydrolase (EC 3.5.1.90) No genes
Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) QEN71_RS25100
Adenosylcobinamide-phosphate synthase No genes
Aerobic cobaltochelatase CobS subunit (EC 6.6.1.2) QEN71_RS41500
Aerobic cobaltochelatase CobT subunit (EC 6.6.1.2) QEN71_RS41495
Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) QEN71_RS24030
  QEN71_RS25120
CblX, a non-orthologous displasment for Alpha-ribazole-5'-phosphate phosphatase No genes
CblY, a non-orthologous displasment for Alpha-ribazole-5'-phosphate phosphatase No genes
CblZ, a non-orthologous displasment for Alpha-ribazole-5'-phosphate phosphatase No genes
ChlD component of cobalt chelatase involved in B12 biosynthesis QEN71_RS08725
ChlI component of cobalt chelatase involved in B12 biosynthesis QEN71_RS08720
Cob(I)alamin adenosyltransferase (EC 2.5.1.17) QEN71_RS08695
Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17) No genes
Cob(II)alamin reductase No genes
CobN component of cobalt chelatase involved in B12 biosynthesis QEN71_RS08715
CobW GTPase involved in cobalt insertion for B12 biosynthesis QEN71_RS08710
Cobalamin biosynthesis protein CbiG QEN71_RS08700
  QEN71_RS08745
Cobalamin biosynthesis protein CobG QEN71_RS08760
Cobalamin synthase No genes
Cobalamine-related hypothetical metal-binding protein CrdX No genes
Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130) QEN71_RS08750
Cobalt-precorrin-3b C17-methyltransferase QEN71_RS08745
Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133) QEN71_RS08780
Cobalt-precorrin-6 synthase, anaerobic QEN71_RS08770
Cobalt-precorrin-6x reductase (EC 1.3.1.54) QEN71_RS08775
Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-) QEN71_RS08765
Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) QEN71_RS08765
Cobalt-precorrin-8x methylmutase (EC 5.4.1.2) QEN71_RS08755
Cobyric acid synthase No genes
Cobyrinic acid A,C-diamide synthase QEN71_RS08690
Duplicated ATPase component CbrU of energizing module of predicted cobalamin ECF transporter No genes
HoxN/HupN/NixA family cobalt transporter No genes
HupE-UreJ family cobalt transporter No genes
L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) QEN71_RS25110
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) QEN71_RS25130
Optional hypothetical component of the B12 transporter BtuM No genes
Optional hypothetical component of the B12 transporter BtuN No genes
Outer membrane vitamin B12 receptor BtuB QEN71_RS25145
Precorrin-6A synthase (EC 2.1.1.152) No genes
Predicted adenosylcobinamide-phosphate guanylyltransferase CobY (EC 2.7.7.62) No genes
Predicted alpha-ribazole-5'-phosphate phosphatase CobZ (EC 3.1.3.73) No genes
Predicted alpha-ribazole-5-phosphate synthase CblS for cobalamin biosynthesis No genes
Predicted cobalt ABC transporter periplasmic component No genes
Predicted cobalt transporter CbtA QEN71_RS12505
Predicted cobalt transporter CbtC No genes
Predicted cobalt transporter in Bacteroides_Porphyromonas No genes
Predicted cobalt transporter in Mycobacteria No genes
Predicted cobalt transporter in Thermoplasma No genes
Predicted cobalt transporter in sulfate-reducing delta-proteobacteria No genes
Putative 2Fe-2S ferredoxin CbiW involved in B12 biosynthesis No genes
Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) QEN71_RS25220
Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3) No genes
Substrate-specific component CbiM of cobalt ECF transporter No genes
Substrate-specific component CblT of predicted B12-regulated ECF transporter for dimethylbenzimidazole No genes
Substrate-specific component CbrT of predicted cobalamin ECF transporter No genes
Threonine kinase in B12 biosynthesis QEN71_RS40455
Transmembrane component CbiQ of energizing module of cobalt ECF transporter No genes
Transmembrane component CbrV of energizing module of predicted cobalamin ECF transporter No genes
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) QEN71_RS08705
  QEN71_RS13600
  QEN71_RS25230
Vitamin B12 ABC transporter, ATPase component BtuD No genes
Vitamin B12 ABC transporter, B12-binding component BtuF QEN71_RS25115
Vitamin B12 ABC transporter, permease component BtuC QEN71_RS25140

Or select organism:

Or view this subsystem at the SEED (slow)