SEED Subsystem: tRNA processing in Pontibacter actiniarum KMM 6156, DSM 19842

Experiments:

Role Gene Name  
5-carboxymethyl uridine and 5-carboxymethyl 2-thiouridine methyltransferase No genes
Ribonuclease BN (EC 3.1.-.-) CA264_01870
  CA264_07855
  CA264_13070
  CA264_15915
  CA264_17585
Ribonuclease D (EC 3.1.26.3) No genes
Ribonuclease P protein component (EC 3.1.26.5) CA264_14695
Ribonuclease PH (EC 2.7.7.56) No genes
Ribonuclease T (EC 3.1.13.-) No genes
Ribonuclease Z (EC 3.1.26.11) CA264_09290
tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) No genes
tRNA pseudouridine 13 synthase (EC 4.2.1.-) No genes
tRNA pseudouridine 55 synthase (EC 4.2.1.70) No genes
tRNA pseudouridine synthase A (EC 4.2.1.70) CA264_03495
  CA264_08260
  CA264_17725
tRNA pseudouridine synthase B (EC 4.2.1.70) CA264_04640
tRNA(Ile)-lysidine synthetase No genes
tRNA-i(6)A37 methylthiotransferase CA264_05315
tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) CA264_14320
tRNAHis-5'-guanylyltransferase No genes

Or select organism:

Or view this subsystem at the SEED (slow)