SEED Subsystem: Isoprenoid Biosynthesis in Hydrogenophaga sp. GW460-11-11-14-LB1

Experiments:

Role Gene Name  
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) GFF4909
1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) GFF5575
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) GFF4863
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) GFF4932
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) GFF4933
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) GFF822
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) GFF1168
Acetyl-CoA acetyltransferase (EC 2.3.1.9) GFF3782
Candidate gene for the hypothesized phosphomevalonate decarboxylase No genes
Dimethylallyltransferase (EC 2.5.1.1) GFF5576
Diphosphomevalonate decarboxylase (EC 4.1.1.33) No genes
Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) No genes
Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34) No genes
Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10) GFF5666
Isopentenyl phosphate kinase No genes
Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) No genes
Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC 5.3.3.2) No genes
Mevalonate kinase (EC 2.7.1.36) No genes
Phosphomevalonate kinase (EC 2.7.4.2) No genes
Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) No genes

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