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SEED Subsystem: Fatty Acid Biosynthesis FASII in
Hydrogenophaga sp. GW460-11-11-14-LB1
Experiments:
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Role
Gene
Name
(3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-)
No genes
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (
EC 4.2.1.60
)
No genes
3-oxoacyl-[acyl-carrier protein] reductase (
EC 1.1.1.100
)
GFF1008
GFF1019
GFF1025
GFF1358
GFF1541
GFF1542
GFF1559
GFF16
GFF2059
GFF2071
GFF2110
GFF2114
GFF2149
GFF2155
GFF2425
GFF2839
GFF2984
GFF3285
GFF3335
GFF3405
GFF3466
GFF3473
GFF3515
GFF3625
GFF3736
GFF3749
GFF3781
GFF408
GFF4317
GFF4375
GFF4600
GFF4827
GFF5014
GFF5387
GFF5391
GFF5548
GFF5603
GFF5668
GFF5695
GFF753
GFF925
GFF933
GFF942
GFF943
GFF959
GFF996
3-oxoacyl-[acyl-carrier-protein] synthase, KASI (
EC 2.3.1.41
)
No genes
3-oxoacyl-[acyl-carrier-protein] synthase, KASI, alternative (
EC 2.3.1.41
)
No genes
3-oxoacyl-[acyl-carrier-protein] synthase, KASII (
EC 2.3.1.41
)
No genes
3-oxoacyl-[acyl-carrier-protein] synthase, KASIII (
EC 2.3.1.41
)
No genes
4'-phosphopantetheinyl transferase (EC 2.7.8.-)
GFF4755
Acetyl-coenzyme A carboxyl transferase alpha chain (
EC 6.4.1.2
)
GFF5139
Acetyl-coenzyme A carboxyl transferase beta chain (
EC 6.4.1.2
)
GFF3353
Acyl carrier protein
GFF3336
Acyl carrier protein phosphodiesterase (
EC 3.1.4.14
)
No genes
Biotin carboxyl carrier protein of acetyl-CoA carboxylase
GFF586
Biotin carboxylase of acetyl-CoA carboxylase (
EC 6.3.4.14
)
GFF5837
GFF587
Enoyl-[acyl-carrier-protein] reductase [FMN] (
EC 1.3.1.9
)
GFF1831
GFF4322
GFF5852
Enoyl-[acyl-carrier-protein] reductase [NADH] (
EC 1.3.1.9
)
GFF4334
Enoyl-[acyl-carrier-protein] reductase [NADPH] (
EC 1.3.1.10
)
No genes
Holo-[acyl-carrier protein] synthase (
EC 2.7.8.7
)
GFF3350
Holo-[acyl-carrier protein] synthase, alternative (
EC 2.7.8.7
)
No genes
Malonyl CoA-acyl carrier protein transacylase (
EC 2.3.1.39
)
GFF3334
GFF4738
GFF4744
GFF4746
GFF4749
GFF4750
GFF4751
GFF4752
GFF4753
Trans-2,cis-3-Decenoyl-ACP isomerase
No genes
Transcriptional regulator of fatty acid biosynthesis FabT
No genes
Or select organism:
Acidovorax sp. GW101-3H11
Acinetobacter baumannii LAC-4
Acinetobacter radioresistens SK82
Agrobacterium fabrum C58
Alteromonas macleodii MIT1002
Azospirillum brasilense Sp245
Azospirillum sp. SherDot2
Bacteroides ovatus ATCC 8483
Bacteroides stercoris CC31F
Bacteroides thetaiotaomicron VPI-5482
Bifidobacterium breve UCC2003
Bosea sp. OAE506
Brevundimonas sp. GW460-12-10-14-LB2
Burkholderia phytofirmans PsJN
Castellaniella sp019104865 MT123
Caulobacter crescentus NA1000
Caulobacter crescentus NA1000 Δfur
Cellulophaga baltica 18
Cupriavidus basilensis FW507-4G11
Dechlorosoma suillum PS
Desulfovibrio vulgaris Hildenborough JW710
Desulfovibrio vulgaris Miyazaki F
Dickeya dadantii 3937
Dickeya dianthicola 67-19
Dickeya dianthicola ME23
Dinoroseobacter shibae DFL-12
Dyella japonica UNC79MFTsu3.2
Echinicola vietnamensis KMM 6221, DSM 17526
Enterobacter asburiae PDN3
Enterobacter sp. TBS_079
Erwinia amylovora T8
Erwinia tracheiphila HP pepo 2.2
Erwinia tracheiphila SCR3
Escherichia coli BL21
Escherichia coli BW25113
Escherichia coli ECOR27
Escherichia coli ECOR38
Escherichia coli ECRC100
Escherichia coli ECRC101
Escherichia coli ECRC102
Escherichia coli ECRC62
Escherichia coli ECRC98
Escherichia coli ECRC99
Escherichia coli HS(pFamp)R (ATCC 700891)
Escherichia coli Nissle 1917
Escherichia fergusonii Becca
Fusobacterium nucleatum SB010
Herbaspirillum seropedicae SmR1
Hydrogenophaga sp. GW460-11-11-14-LB1
Kangiella aquimarina DSM 16071
Klebsiella michiganensis M5al
Klebsiella pneumoniae MKP103
Klebsiella pneumoniae MRSN742743
Lysobacter sp. OAE881
Magnetospirillum magneticum AMB-1
Marinobacter adhaerens HP15
Methanococcus maripaludis JJ
Methanococcus maripaludis S2
Methylophilus sp. DMC18
Mucilaginibacter yixingensis YX-36 DSM 26809
Mycobacterium tuberculosis H37Rv
Pantoea agglomerans CFBP13505 P0401
Pantoea sp. MT58
Parabacteroides merdae CL09T00C40
Paraburkholderia bryophila 376MFSha3.1
Paraburkholderia graminis OAS925
Paraburkholderia sabiae LMG 24235
Pectobacterium carotovorum WPP14
Pedobacter sp. GW460-11-11-14-LB5
Phaeobacter inhibens DSM 17395
Phocaeicola dorei CL03T12C01
Phocaeicola vulgatus CL09T03C04
Pontibacter actiniarum KMM 6156, DSM 19842
Pseudomonas aeruginosa MRSN321
Pseudomonas aeruginosa PA14
Pseudomonas aeruginosa PUPa3
Pseudomonas fluorescens FW300-N1B4
Pseudomonas fluorescens FW300-N2C3
Pseudomonas fluorescens FW300-N2E2
Pseudomonas fluorescens FW300-N2E3
Pseudomonas fluorescens GW456-L13
Pseudomonas fluorescens SBW25
Pseudomonas fluorescens SBW25-INTG
Pseudomonas lactucae CFBP13502
Pseudomonas orientalis W4I3
Pseudomonas putida KT2440
Pseudomonas segetis P6
Pseudomonas simiae WCS417
Pseudomonas sp. BP01
Pseudomonas sp. DMC3
Pseudomonas sp. RS175
Pseudomonas sp. S08-1
Pseudomonas sp. SVBP6
Pseudomonas stutzeri RCH2
Pseudomonas syringae pv. syringae B728a
Pseudomonas syringae pv. syringae B728a ΔmexB
Rahnella sp. WP5
Ralstonia solanacearum GMI1000
Ralstonia solanacearum IBSBF1503
Ralstonia solanacearum PSI07
Ralstonia solanacearum UW163
Ralstonia sp. UNC404CL21Col
Rhizobium sp. OAE497
Rhodanobacter denitrificans FW104-10B01
Rhodanobacter denitrificans MT42
Rhodanobacter sp. FW510-T8
Rhodanobacter sp000427505 FW510-R12
Rhodopseudomonas palustris CGA009
Rhodospirillum rubrum S1H
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
Serratia liquefaciens MT49
Shewanella amazonensis SB2B
Shewanella loihica PV-4
Shewanella oneidensis MR-1
Shewanella sp. ANA-3
Sinorhizobium meliloti 1021
Sphingobium sp. HT1-2
Sphingomonas koreensis DSMZ 15582
Synechococcus elongatus PCC 7942
Synechocystis sp000284455 PCC 6803
Variovorax sp. OAS795
Variovorax sp. SCN45
Vibrio cholerae E7946 ATCC 55056
Xanthobacter sp. DMC5
Xanthomonas campestris pv. campestris strain 8004
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