SEED Subsystem: DNA-replication in Pantoea agglomerans CFBP13505 P0401

Experiments:

Role Gene Name  
ATP-dependent DNA helicase RecG (EC 3.6.1.-) PagCFBP13516_RS00485 recG
ATP-dependent DNA helicase RecQ PagCFBP13516_RS18615 recQ
Arrested fork binding No genes
Chromosomal replication initiator protein DnaA PagCFBP13516_RS00005 dnaA
  PagCFBP13516_RS05485 hda
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) PagCFBP13516_RS08615 ruvC
DNA polymerase I (EC 2.7.7.7) PagCFBP13516_RS00410 polA
  PagCFBP13516_RS04310 xni
DNA polymerase II (EC 2.7.7.7) PagCFBP13516_RS16360 polB
DNA polymerase III alpha subunit (EC 2.7.7.7) PagCFBP13516_RS15770 dnaE
DNA polymerase III beta subunit (EC 2.7.7.7) PagCFBP13516_RS00010 dnaN
DNA polymerase III chi subunit (EC 2.7.7.7) PagCFBP13516_RS17040
DNA polymerase III delta prime subunit (EC 2.7.7.7) PagCFBP13516_RS12100 holB
DNA polymerase III delta subunit (EC 2.7.7.7) PagCFBP13516_RS14115 holA
DNA polymerase III epsilon subunit (EC 2.7.7.7) PagCFBP13516_RS15635 dnaQ
DNA polymerase III psi subunit (EC 2.7.7.7) PagCFBP13516_RS16680
DNA polymerase III subunits gamma and tau (EC 2.7.7.7) PagCFBP13516_RS14725 dnaX
  PagCFBP13516_RS22445
DNA polymerase III theta subunit (EC 2.7.7.7) PagCFBP13516_RS08700
  PagCFBP13516_RS23485
DNA primase (EC 2.7.7.-) PagCFBP13516_RS03295 dnaG
  PagCFBP13516_RS19160
DNA primase (EC 2.7.7.-), phage-associated No genes
DNA primase TraC (EC 2.7.7.-) No genes
DNA repair protein RecN PagCFBP13516_RS05100 recN
DNA replication protein DnaC PagCFBP13516_RS00145 dnaC
DNA replication terminus site-binding protein PagCFBP13516_RS10505 tus
Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) PagCFBP13516_RS04240 recD
Exodeoxyribonuclease V beta chain (EC 3.1.11.5) PagCFBP13516_RS04235 recB
Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) PagCFBP13516_RS04225 recC
Helicase PriA essential for oriC/DnaA-independent DNA replication PagCFBP13516_RS00860 priA
Helicase loader DnaI No genes
Holliday junction DNA helicase RuvA PagCFBP13516_RS08620 ruvA
Holliday junction DNA helicase RuvB PagCFBP13516_RS08625 ruvB
Primosomal protein I PagCFBP13516_RS00140 dnaT
Primosomal replication protein N PagCFBP13516_RS02680 priB
Primosomal replication protein N prime prime PagCFBP13516_RS14740 priC
RecA protein PagCFBP13516_RS04670 recA
Recombination protein RecR PagCFBP13516_RS14715 recR
Replicative DNA helicase (EC 3.6.1.-) PagCFBP13516_RS18085 dnaB
Replicative DNA helicase (EC 3.6.1.-) [SA14-24] No genes
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) PagCFBP13516_RS04060 recJ
Transcription-repair coupling factor PagCFBP13516_RS12030 mfd

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