SEED Subsystem: D-ribose utilization in Pantoea agglomerans CFBP13505 P0401

Experiments:

Role Gene Name  
Predicted nucleoside ABC transporter, ATP-binding component No genes
Predicted nucleoside ABC transporter, permease 1 component No genes
Predicted nucleoside ABC transporter, permease 2 component No genes
Predicted nucleoside ABC transporter, substrate-binding component No genes
Predicted regulator of ribose utilization, LacI family No genes
Putative ribose uptake protein RbsU, GRP transporter family (TC 2.A.7.5) No genes
Ribokinase (EC 2.7.1.15) PagCFBP13516_RS00350 rbsK
  PagCFBP13516_RS10150
  PagCFBP13516_RS16625 rbsK
Ribose 5-phosphate isomerase A (EC 5.3.1.6) PagCFBP13516_RS03950 rpiA
Ribose 5-phosphate isomerase B (EC 5.3.1.6) No genes
Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1) PagCFBP13516_RS00335 rbsA
  PagCFBP13516_RS10165
  PagCFBP13516_RS11310
  PagCFBP13516_RS11850
  PagCFBP13516_RS15450
Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1) PagCFBP13516_RS00330 rbsD
Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) PagCFBP13516_RS00345 rbsB
  PagCFBP13516_RS01235
  PagCFBP13516_RS11860
Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) PagCFBP13516_RS00340 rbsC
  PagCFBP13516_RS10160
  PagCFBP13516_RS11305
  PagCFBP13516_RS11845
  PagCFBP13516_RS15455
Ribose operon repressor PagCFBP13516_RS00355 rbsR
  PagCFBP13516_RS17680
  PagCFBP13516_RS20600
Ribose/xylose/arabinose/galactoside ABC-type transport systems, ATP-binding protein (EC 3.6.3.17) No genes
Ribose/xylose/arabinose/galactoside ABC-type transport systems, periplasmic sugar binding protein No genes
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component 1 No genes
Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component 2 No genes

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Or view this subsystem at the SEED (slow)