SEED Subsystem: DNA-replication in Pseudomonas aeruginosa MRSN321

Experiments:

Role Gene Name  
ATP-dependent DNA helicase RecG (EC 3.6.1.-) DY961_RS12615 recG;go_function=nucleic
ATP-dependent DNA helicase RecQ DY961_RS00140 recQ;go_function=DNA
  DY961_RS03540
Arrested fork binding No genes
Chromosomal replication initiator protein DnaA DY961_RS07700 hda;go_function=hydrolase
  DY961_RS26205 dnaA;go_function=DNA
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) DY961_RS07605 ruvC;go_function=crossover
DNA polymerase I (EC 2.7.7.7) DY961_RS25765 polA;go_function=nucleic
DNA polymerase II (EC 2.7.7.7) DY961_RS21180
DNA polymerase III alpha subunit (EC 2.7.7.7) DY961_RS09185 dnaE2;inference=COORDINATES
  DY961_RS14775 dnaE;go_function=nucleic
DNA polymerase III beta subunit (EC 2.7.7.7) DY961_RS26210 dnaN;go_component=DNA
DNA polymerase III chi subunit (EC 2.7.7.7) DY961_RS13730 holC;inference=COORDINATES
DNA polymerase III delta prime subunit (EC 2.7.7.7) DY961_RS02170
DNA polymerase III delta subunit (EC 2.7.7.7) DY961_RS12905 holA;go_component=DNA
DNA polymerase III epsilon subunit (EC 2.7.7.7) DY961_RS20810 dnaQ;go_function=DNA
DNA polymerase III psi subunit (EC 2.7.7.7) No genes
DNA polymerase III subunits gamma and tau (EC 2.7.7.7) DY961_RS19285 dnaX;go_component=DNA
DNA polymerase III theta subunit (EC 2.7.7.7) No genes
DNA primase (EC 2.7.7.-) DY961_RS22910 dnaG;go_function=DNA
DNA primase (EC 2.7.7.-), phage-associated No genes
DNA primase TraC (EC 2.7.7.-) No genes
DNA repair protein RecN DY961_RS09575 recN;go_function=ATP
DNA replication protein DnaC No genes
DNA replication terminus site-binding protein No genes
Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) DY961_RS25090 recD;go_component=exodeoxyribonuclease
Exodeoxyribonuclease V beta chain (EC 3.1.11.5) DY961_RS25085 recB;go_component=exodeoxyribonuclease
Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) DY961_RS25080 recC;go_component=exodeoxyribonuclease
Helicase PriA essential for oriC/DnaA-independent DNA replication DY961_RS11070
Helicase loader DnaI No genes
Holliday junction DNA helicase RuvA DY961_RS07600 ruvA;go_component=Holliday
Holliday junction DNA helicase RuvB DY961_RS07595 ruvB;go_function=DNA
Primosomal protein I No genes
Primosomal replication protein N No genes
Primosomal replication protein N prime prime No genes
RecA protein DY961_RS14895 recA;go_component=cytoplasm|0005737||IEA;go_function=DNA
Recombination protein RecR DY961_RS19295 recR;go_process=DNA
Replicative DNA helicase (EC 3.6.1.-) DY961_RS10435 dnaB;go_function=DNA
Replicative DNA helicase (EC 3.6.1.-) [SA14-24] No genes
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) DY961_RS14350 recJ;go_function=single-stranded
Transcription-repair coupling factor DY961_RS01955 mfd;go_function=nucleic

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