SEED Subsystem: DNA-replication in Methylophilus sp. DMC18

Experiments:

Role Gene Name  
ATP-dependent DNA helicase RecG (EC 3.6.1.-) GFF2125
ATP-dependent DNA helicase RecQ GFF2139
Arrested fork binding No genes
Chromosomal replication initiator protein DnaA GFF2109
  GFF2293
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) GFF2325
DNA polymerase I (EC 2.7.7.7) GFF1658
DNA polymerase II (EC 2.7.7.7) No genes
DNA polymerase III alpha subunit (EC 2.7.7.7) GFF1272
DNA polymerase III beta subunit (EC 2.7.7.7) GFF2110
DNA polymerase III chi subunit (EC 2.7.7.7) GFF1515
DNA polymerase III delta prime subunit (EC 2.7.7.7) GFF630
DNA polymerase III delta subunit (EC 2.7.7.7) GFF255
DNA polymerase III epsilon subunit (EC 2.7.7.7) GFF1320
  GFF1363
  GFF1760
DNA polymerase III psi subunit (EC 2.7.7.7) No genes
DNA polymerase III subunits gamma and tau (EC 2.7.7.7) GFF1239
DNA polymerase III theta subunit (EC 2.7.7.7) No genes
DNA primase (EC 2.7.7.-) GFF2348
DNA primase (EC 2.7.7.-), phage-associated No genes
DNA primase TraC (EC 2.7.7.-) No genes
DNA repair protein RecN GFF306
DNA replication protein DnaC No genes
DNA replication terminus site-binding protein No genes
Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) No genes
Exodeoxyribonuclease V beta chain (EC 3.1.11.5) No genes
Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) No genes
Helicase PriA essential for oriC/DnaA-independent DNA replication GFF2076
Helicase loader DnaI No genes
Holliday junction DNA helicase RuvA GFF2326
Holliday junction DNA helicase RuvB GFF2327
Primosomal protein I No genes
Primosomal replication protein N GFF1041
Primosomal replication protein N prime prime No genes
RecA protein GFF841
Recombination protein RecR GFF1237
Replicative DNA helicase (EC 3.6.1.-) GFF1044
Replicative DNA helicase (EC 3.6.1.-) [SA14-24] No genes
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) GFF889
Transcription-repair coupling factor GFF356

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