SEED Subsystem: Nitrate and nitrite ammonification in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Experiments:

Role Gene Name  
Assimilatory nitrate reductase large subunit (EC:1.7.99.4) No genes
Cytochrome c nitrite reductase, small subunit NrfH No genes
Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly No genes
Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly No genes
Cytochrome c-type heme lyase subunit nrfG, nitrite reductase complex assembly GFF1458
Cytochrome c-type protein NapC GFF1817
Cytochrome c-type protein NrfB precursor GFF1454
Cytochrome c552 precursor (EC 1.7.2.2) GFF1453
Ferredoxin--nitrite reductase (EC 1.7.7.1) No genes
Ferredoxin-type protein NapF (periplasmic nitrate reductase) GFF1823
Ferredoxin-type protein NapG (periplasmic nitrate reductase) GFF1820
Nitrate ABC transporter, ATP-binding protein No genes
Nitrate ABC transporter, nitrate-binding protein No genes
Nitrate ABC transporter, permease protein No genes
Nitrate reductase cytochrome c550-type subunit GFF1818
Nitrate/nitrite response regulator protein GFF1492
  GFF2765
Nitrate/nitrite sensor protein (EC 2.7.3.-) GFF2189
  GFF2764
Nitrate/nitrite transporter GFF1835
  GFF2567
  GFF2763
  GFF583
Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) GFF3704
Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) GFF3703
Nitrite reductase probable [NAD(P)H] subunit (EC 1.7.1.4) No genes
Nitrite reductase probable electron transfer 4Fe-S subunit (EC 1.7.1.4) No genes
Nitrite transporter NirC GFF3701
Nitrite transporter from formate/nitrite family No genes
NrfC protein GFF1455
NrfD protein GFF1456
Periplasmic nitrate reductase component NapD No genes
Periplasmic nitrate reductase component NapE No genes
Periplasmic nitrate reductase component NapL No genes
Periplasmic nitrate reductase precursor (EC 1.7.99.4) GFF1821
Polyferredoxin NapH (periplasmic nitrate reductase) GFF1819
Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly No genes
Respiratory nitrate reductase alpha chain (EC 1.7.99.4) GFF2568
  GFF2762
Respiratory nitrate reductase beta chain (EC 1.7.99.4) GFF2569
  GFF2761
Respiratory nitrate reductase delta chain (EC 1.7.99.4) GFF2570
Respiratory nitrate reductase gamma chain (EC 1.7.99.4) GFF2571
  GFF2759
Respiratory nitrate reductase subunit, conjectural (EC 1.7.99.4) No genes
Response regulator NasT No genes

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