SEED Subsystem: Isoprenoid Biosynthesis in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Experiments:

Role Gene Name  
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) GFF49
1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) GFF4324
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) GFF2412
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) GFF4794
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) GFF4795
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) GFF2778
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) GFF1129
Acetyl-CoA acetyltransferase (EC 2.3.1.9) No genes
Candidate gene for the hypothesized phosphomevalonate decarboxylase No genes
Dimethylallyltransferase (EC 2.5.1.1) No genes
Diphosphomevalonate decarboxylase (EC 4.1.1.33) No genes
Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) No genes
Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34) No genes
Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10) No genes
Isopentenyl phosphate kinase No genes
Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) GFF2986
Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC 5.3.3.2) No genes
Mevalonate kinase (EC 2.7.1.36) No genes
Phosphomevalonate kinase (EC 2.7.4.2) No genes
Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) No genes

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