SEED Subsystem: DNA Repair Base Excision in Klebsiella pneumoniae MKP103

Experiments:

Role Gene Name  
ATP-dependent DNA ligase (EC 6.5.1.1) No genes
ATP-dependent DNA ligase (EC 6.5.1.1) LigC No genes
ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD No genes
DNA ligase (EC 6.5.1.2) KDGMDA_27470
DNA polymerase I (EC 2.7.7.7) KDGMDA_03465
  KDGMDA_08970
DNA polymerase II (EC 2.7.7.7) KDGMDA_12800
DNA-3-methyladenine glycosylase (EC 3.2.2.20) KDGMDA_07650
DNA-3-methyladenine glycosylase II (EC 3.2.2.21) KDGMDA_26265
Endonuclease III (EC 4.2.99.18) KDGMDA_23325
Endonuclease VIII KDGMDA_16700
Exodeoxyribonuclease I (EC 3.1.11.1) KDGMDA_26035
Flap structure-specific endonuclease (EC 3.-.-.-) No genes
Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) KDGMDA_08015
Ku domain protein No genes
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) KDGMDA_04290
Single-stranded-DNA-specific exonuclease RecJ, clostridial paralog No genes
Single-stranded-DNA-specific exonuclease RecJ, cyanobacterial paralog No genes
Uracil-DNA glycosylase, family 1 KDGMDA_28505

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