SEED Subsystem: Pyrimidine utilization in Escherichia coli BW25113

Experiments:

Role Gene Name  
Beta-ureidopropionase (EC 3.5.1.6) No genes
Dihydropyrimidinase (EC 3.5.2.2) No genes
Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2) b2147 yeiA
Possible hydrolase or acyltransferase RutD in novel pyrimidine catabolism pathway No genes
Possible pyrimidine permease in reductive pathway No genes
Possible ring-opening amidohydrolase RutC in novel pyrimidine catabolism pathway No genes
Predicted amidohydrolase RutB in novel pyrimidine catabolism pathway b1011 b1011
Predicted flavin reductase RutF in novel pyrimidine catabolism pathway b1007 b1007
Predicted monooxygenase RutA in novel pyrimidine catabolism pathway b1012 b1012
Predicted reductase RutE in novel pyrimidine catabolism pathway b1008 ycdI
Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism No genes
Pyrimidine ABC transporter, ATP-binding protein No genes
Pyrimidine ABC transporter, substrate-binding component No genes
Pyrimidine ABC transporter, transmembrane component 1 No genes
Pyrimidine ABC transporter, transmembrane component 2 No genes
Transcriptional regulator RutR of pyrimidine catabolism (TetR family) b1013 ycdC
Uracil permease b1006 ycdG
  b2497 uraA

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Or view this subsystem at the SEED (slow)