SEED Subsystem: Nitrate and nitrite ammonification in Escherichia coli BW25113

Experiments:

Role Gene Name  
Assimilatory nitrate reductase large subunit (EC:1.7.99.4) No genes
Cytochrome c nitrite reductase, small subunit NrfH No genes
Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly b4074 nrfE
Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly b4075 nrfF
Cytochrome c-type heme lyase subunit nrfG, nitrite reductase complex assembly b4076 nrfG
Cytochrome c-type protein NapC b2202 napC
Cytochrome c-type protein NrfB precursor b4071 nrfB
Cytochrome c552 precursor (EC 1.7.2.2) b4070 nrfA
Ferredoxin--nitrite reductase (EC 1.7.7.1) No genes
Ferredoxin-type protein NapF (periplasmic nitrate reductase) b2208 napF
Ferredoxin-type protein NapG (periplasmic nitrate reductase) b2205 napG
Nitrate ABC transporter, ATP-binding protein No genes
Nitrate ABC transporter, nitrate-binding protein No genes
Nitrate ABC transporter, permease protein No genes
Nitrate reductase cytochrome c550-type subunit b2203 napB
Nitrate/nitrite response regulator protein b2193 narP
Nitrate/nitrite sensor protein (EC 2.7.3.-) b1222 narX
  b2469 narQ
Nitrate/nitrite transporter No genes
Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) b3365 nirB
Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) b3366 nirD
Nitrite reductase probable [NAD(P)H] subunit (EC 1.7.1.4) No genes
Nitrite reductase probable electron transfer 4Fe-S subunit (EC 1.7.1.4) No genes
Nitrite transporter NirC b3367 nirC
Nitrite transporter from formate/nitrite family No genes
NrfC protein b4072 nrfC
NrfD protein b4073 nrfD
Periplasmic nitrate reductase component NapD b2207 napD
Periplasmic nitrate reductase component NapE No genes
Periplasmic nitrate reductase component NapL No genes
Periplasmic nitrate reductase precursor (EC 1.7.99.4) b2206 napA
Polyferredoxin NapH (periplasmic nitrate reductase) b2204 napH
Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly No genes
Respiratory nitrate reductase alpha chain (EC 1.7.99.4) b1224 narG
  b1468 narZ
Respiratory nitrate reductase beta chain (EC 1.7.99.4) b1225 narH
  b1467 narY
Respiratory nitrate reductase delta chain (EC 1.7.99.4) b1226 narJ
  b1466 narW
Respiratory nitrate reductase gamma chain (EC 1.7.99.4) b1227 narI
  b1465 narV
Respiratory nitrate reductase subunit, conjectural (EC 1.7.99.4) No genes
Response regulator NasT No genes

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