SEED Subsystem: Isoprenoid Biosynthesis in Escherichia coli BW25113

Experiments:

Role Gene Name  
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) b0173 dxr
1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) b0420 dxs
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) b2515 ispG
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) b2746 ispF
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) b2747 ispD
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) b1208 ispE
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) b0029 ispH
Acetyl-CoA acetyltransferase (EC 2.3.1.9) No genes
Candidate gene for the hypothesized phosphomevalonate decarboxylase No genes
Dimethylallyltransferase (EC 2.5.1.1) No genes
Diphosphomevalonate decarboxylase (EC 4.1.1.33) No genes
Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) No genes
Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34) No genes
Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10) No genes
Isopentenyl phosphate kinase No genes
Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) b2889 idi
Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC 5.3.3.2) No genes
Mevalonate kinase (EC 2.7.1.36) No genes
Phosphomevalonate kinase (EC 2.7.4.2) No genes
Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) No genes

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