| Role | Gene | Name | |
| Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) | b2930 | yggF | |
| | b3925 | glpX | |
| Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) | b4232 | fbp | |
| Fructose-1,6-bisphosphatase, type V, archaeal (EC 3.1.3.11) | No genes | | |
| Fructose-bisphosphate aldolase class I (EC 4.1.2.13) | b2097 | b2097 | |
| Fructose-bisphosphate aldolase class II (EC 4.1.2.13) | b2925 | fbaA | |
| NAD(P)-dependent glyceraldehyde 3-phosphate dehydrogenase archaeal (EC 1.2.1.59) | No genes | | |
| NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) | b1779 | gapA | |
| NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) | No genes | | |
| Phosphoglycerate kinase (EC 2.7.2.3) | b2926 | pgk | |
| Phosphoribulokinase (EC 2.7.1.19) | No genes | | |
| Phosphoribulokinase (EC 2.7.1.19) homolog, function unknown | b3355 | prkB | |
| Protein CP12, regulation of Calvin cycle via association/dissociation of PRK/CP12/GAPDH complex | No genes | | |
| Ribose 1,5-bisphosphate or 5-ribose-1,2-cyclic phosphate dehydrogenase | No genes | | |
| Ribose 5-phosphate isomerase A (EC 5.3.1.6) | b2914 | rpiA | |
| Ribose 5-phosphate isomerase B (EC 5.3.1.6) | No genes | | |
| Ribulose bisphosphate carboxylase (EC 4.1.1.39) | No genes | | |
| Ribulose bisphosphate carboxylase large chain (EC 4.1.1.39) | No genes | | |
| Ribulose bisphosphate carboxylase small chain (EC 4.1.1.39) | No genes | | |
| Ribulose-1,5-bisphosphate carboxylase, Type III (EC 4.1.1.39) | No genes | | |
| Ribulose-phosphate 3-epimerase (EC 5.1.3.1) | b3386 | rpe | |
| | b4301 | sgcE | |
| Sedoheptulose-1,7-bisphosphatase (EC 3.1.3.37) | No genes | | |
| Transketolase (EC 2.2.1.1) | b2465 | tktB | |
| | b2935 | tktA | |
| Transketolase, C-terminal section (EC 2.2.1.1) | No genes | | |
| Transketolase, N-terminal section (EC 2.2.1.1) | No genes | | |
| Triosephosphate isomerase (EC 5.3.1.1) | b3919 | tpiA | |