SEED Subsystem: L-rhamnose utilization in Erwinia tracheiphila SCR3

Experiments:

Role Gene Name  
Aldehyde dehydrogenase A (EC 1.2.1.22) No genes
Alfa-L-rhamnosidase (EC 3.2.1.40) No genes
Alternative L-rhamnose isomerase (EC 5.3.1.14) No genes
Glycoside hydrolase family 2, sugar binding No genes
L-2,4-diketo-3-deoxyrhamnonate hydrolase No genes
L-2-keto-3-deoxyrhamnonate (l-KDR) aldolase No genes
L-2-keto-3-deoxyrhamnonate-(4)-dehydrogenase No genes
L-lactate dehydrogenase (EC 1.1.2.3) No genes
L-rhamno-gamma-lactonase (EC 3.1.1.65) No genes
L-rhamnonate dehydratase (EC 4.2.1.90) No genes
L-rhamnose isomerase (EC 5.3.1.14) LU632_RS11680
L-rhamnose isomerase (EC 5.3.1.14) LU632_RS11680
L-rhamnose mutarotase LU632_RS11670 rhaM
L-rhamnose operon regulatory protein RhaS LU632_RS11690 rhaS
L-rhamnose operon transcriptional activator RhaR LU632_RS11695 rhaR
L-rhamnose-1-dehydrogenase ( EC 1.1.1.173) No genes
L-rhamnose-proton symporter LU632_RS11700
Lactaldehyde dehydrogenase involved in fucose or rhamnose utilization (EC 1.2.1.22) No genes
Lactaldehyde reductase (EC 1.1.1.77) LU632_RS21635 fucO
Pedicted L-rhamnose permease, NCS1 Family No genes
Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF No genes
Predicted L-rhamnose ABC transporter, ATP-binding component No genes
Predicted L-rhamnose ABC transporter, substrate-binding component No genes
Predicted L-rhamnose ABC transporter, transmembrane component 1 No genes
Predicted L-rhamnose ABC transporter, transmembrane component 2 No genes
Predicted L-rhamnose mutarotase No genes
Predicted L-rhamnose permease RhaY No genes
Predicted alpha-L-rhamnosidase No genes
Predicted lactaldehyde dehydrogenase (EC 1.2.1.22) No genes
Predicted regulator of rhamnose oligosacchoride utilization, DeoR family No genes
Predicted rhamnogalacturonan lyase in rhamnose utilization cluster No genes
Predicted rhamnogalacturonide-specific TRAP-type transporter, large transmembrane component RhiC No genes
Predicted rhamnogalacturonide-specific TRAP-type transporter, small transmembrane component RhiB No genes
Predicted rhamnogalacturonide-specific TRAP-type transporter, substrate-binding component RhiA No genes
Predicted rhamnose oligosaccharide ABC transporter, ATP-binding component 1 No genes
Predicted rhamnose oligosaccharide ABC transport system, permease component No genes
Predicted rhamnose oligosaccharide ABC transport system, permease component 2 No genes
Predicted rhamnose oligosaccharide ABC transport system, substrate-binding component No genes
Predicted rhamnose oligosaccharide ABC transporter, ATP-binding component 2 No genes
Predicted rhamnose oligosaccharide ABC transporter, permease component 1 No genes
Predicted rhamnose oligosaccharide ABC transporter, permease component 2 No genes
Predicted rhamnose oligosaccharide ABC transporter, substrate-binding component No genes
Predicted rhamnulose-1-phosphate aldolase (EC 4.1.2.19) No genes
Putative beta-glucuronidase No genes
Putative unsaturated glucuronyl hydrolase No genes
Rhamnogalacturonide transporter RhiT LU632_RS00625
Rhamnogalacturonides degradation protein RhiN LU632_RS00620
Rhamnulokinase (EC 2.7.1.5) LU632_RS11685 rhaB
Rhamnulokinase RhaK in alpha-proteobacteria (EC 2.7.1.5) No genes
Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) LU632_RS11675 rhaD
Transcriptional regulator of rhamnose utilization, AraC family No genes
Transcriptional regulator of rhamnose utilization, DeoR family No genes
Transcriptional regulator of rhamnose utilization, GntR family No genes
Transcriptional regulator of rhamnose utilization, LacI family No genes
Transcriptional regulator of rhamnose utilization, LysR family No genes
rhamnogalacturonan acetylesterase No genes

Or select organism:

Or view this subsystem at the SEED (slow)