SEED Subsystem: DNA Repair Base Excision in Erwinia tracheiphila SCR3

Experiments:

Role Gene Name  
ATP-dependent DNA ligase (EC 6.5.1.1) No genes
ATP-dependent DNA ligase (EC 6.5.1.1) LigC No genes
ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD No genes
DNA ligase (EC 6.5.1.2) LU632_RS06640 ligA
DNA polymerase I (EC 2.7.7.7) LU632_RS06270 xni
  LU632_RS17530
  LU632_RS23870 polA
DNA polymerase II (EC 2.7.7.7) LU632_RS02810 polB
DNA-3-methyladenine glycosylase (EC 3.2.2.20) LU632_RS00080
DNA-3-methyladenine glycosylase II (EC 3.2.2.21) No genes
Endonuclease III (EC 4.2.99.18) LU632_RS11305 nth
Endonuclease VIII No genes
Exodeoxyribonuclease I (EC 3.1.11.1) LU632_RS15835 sbcB
Flap structure-specific endonuclease (EC 3.-.-.-) No genes
Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) LU632_RS21975 mutM
Ku domain protein No genes
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) LU632_RS05985 recJ
Single-stranded-DNA-specific exonuclease RecJ, clostridial paralog No genes
Single-stranded-DNA-specific exonuclease RecJ, cyanobacterial paralog No genes
Uracil-DNA glycosylase, family 1 LU632_RS16970 ung

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Or view this subsystem at the SEED (slow)