SEED Subsystem: D-Galacturonate and D-Glucuronate Utilization in Enterobacter asburiae PDN3

Experiments:

Role Gene Name  
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase (EC 1.1.1.127) No genes
2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) EX28DRAFT_4051
2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) No genes
2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125) EX28DRAFT_2921
2-keto-3-deoxygluconate permease (KDG permease) EX28DRAFT_4195
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17) EX28DRAFT_2922
5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41) No genes
Alcohol dehydrogenase, zinc-containing No genes
Alpha-1,4-digalacturonate ABC transporter, permease protein 1 No genes
Alpha-1,4-digalacturonate ABC transporter, permease protein 2 No genes
Alpha-1,4-digalacturonate ABC transporter, substrate-binding protein No genes
Alpha-glucosidase (EC 3.2.1.20) EX28DRAFT_2146
Alpha-glucuronidase (EC 3.2.1.139) No genes
Altronate hydrolase (EC 4.2.1.7) No genes
Altronate oxidoreductase (EC 1.1.1.58) EX28DRAFT_1191
Beta-glucuronidase (EC 3.2.1.31) No genes
Carbohydrate-binding, CenC domain protein No genes
D-galactarate dehydratase (EC 4.2.1.42) EX28DRAFT_3184
D-mannonate oxidoreductase (EC 1.1.1.57) EX28DRAFT_0389
  EX28DRAFT_1454
Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) No genes
Exopolygalacturonate lyase (EC 4.2.2.9) No genes
Fructuronate transporter GntP No genes
Galacturan 1,4-alpha-galacturonidase (EC 3.2.1.67) No genes
Glucuronide permease No genes
Glucuronide transport facilitator UidC No genes
Glucuronide transporter UidB No genes
Hexuronate transporter EX28DRAFT_2145
  EX28DRAFT_3161
Hexuronate utilization operon transcriptional repressor ExuR EX28DRAFT_3162
Intracellular alpha-amylase (EC 3.2.1.1) No genes
Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) No genes
Mannonate dehydratase (EC 4.2.1.8) EX28DRAFT_0390
Novel D-mannonate dehydrogenase (EC 1.1.1.57) No genes
Novel D-mannonate-D-gluconate epimerase No genes
Novel D-tagaturonate epimerase No genes
Oligogalacturonate lyase (EC 4.2.2.6) No genes
Oligogalacturonate-specific porin protein KdgM No genes
Pectate lyase precursor (EC 4.2.2.2) No genes
Pectin degradation protein KdgF No genes
Pectin lyase (EC 4.2.2.10) No genes
Pectinesterase (EC 3.1.1.11) EX28DRAFT_2224
Polygalacturonase (EC 3.2.1.15) No genes
Predicted 2-keto-3-deoxygluconate-responsive regulator of glucuronate utilization, IclR family No genes
Predicted D-glucuronide-specific TRAP transporter, large transmembrane component No genes
Predicted D-glucuronide-specific TRAP transporter, small transmembrane component No genes
Predicted D-glucuronide-specific TRAP transporter, substrate-binding component No genes
Putative methyl oligogalcturonate esterase No genes
Regulator of pectin and galacturonate utilization, GntR family No genes
Rhamnogalacturonides degradation protein RhiN No genes
Transcriptional regulator KdgR, KDG operon repressor EX28DRAFT_0729
Transcriptional repressor UidR No genes
Uronate dehydrogenase (EC 1.1.1.203) No genes
Uronate isomerase (EC 5.3.1.12) EX28DRAFT_3160
Uronate isomerase, family BH0493 (EC 5.3.1.12) No genes
Uxu operon transcriptional regulator No genes
Xylan oligosaccharide ABC transporter, ATP-binding protein 1 No genes
Xylan oligosaccharide ABC transporter, substrate-binding component No genes
Xylan oligosaccharide ABC transporter, ATP-binding protein 2 No genes
Xylan oligosaccharide ABC transporter, permease component 1 No genes
Xylan oligosaccharide ABC transporter, permease component 2 No genes

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