SEED Subsystem: Polyamine Metabolism in Escherichia coli HS(pFamp)R (ATCC 700891)

Experiments:

Role Gene Name  
4-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) OHPLBJKB_02271
5'-methylthioadenosine nucleosidase (EC 3.2.2.16) No genes
ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) OHPLBJKB_02275
  OHPLBJKB_02545
Agmatinase (EC 3.5.3.11) OHPLBJKB_00779
Agmatine deiminase (EC 3.5.3.12) No genes
Agmatine/putrescine antiporter, associated with agmatine catabolism No genes
Arginine decarboxylase (EC 4.1.1.19) No genes
Arginine decarboxylase, catabolic (EC 4.1.1.19) OHPLBJKB_03927
Arginine/agmatine antiporter OHPLBJKB_03929
Arginine/ornithine antiporter No genes
Arginine/ornithine antiporter ArcD OHPLBJKB_02121
Biosynthetic arginine decarboxylase (EC 4.1.1.19) OHPLBJKB_00778
Carbamate kinase (EC 2.7.2.2) OHPLBJKB_03160
  OHPLBJKB_03352
Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-) No genes
Carboxynorspermidine dehydrogenase, putative (EC 1.1.1.-) No genes
DNA-binding response regulator, LuxR family, near polyamine transporter No genes
N-carbamoylputrescine amidase (3.5.1.53) No genes
Ornithine decarboxylase (EC 4.1.1.17) OHPLBJKB_00751
Predicted chaperone lipoprotein YacC, potentially involved in protein secretion OHPLBJKB_03539
Predicted polyamine sensor NspS, involved in biofilm formation No genes
Probable spermidine/putrescine substrate binding protein in Mollicutes No genes
Probable two-component sensor, near polyamine transporter No genes
Putative GntR-family regulatory protein and aminotransferase near polyamine transporter No genes
Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) OHPLBJKB_02814
Putrescine carbamoyltransferase (EC 2.1.3.6) No genes
Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) OHPLBJKB_02274
  OHPLBJKB_02542
Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) OHPLBJKB_02813
Putrescine transport system permease protein PotH (TC 3.A.1.11.2) OHPLBJKB_02812
Putrescine transport system permease protein PotI (TC 3.A.1.11.2) OHPLBJKB_02811
Putrescine-ornithine antiporter No genes
Putrescine/proton symporter, putrescine/ornithine antiporter PotE No genes
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), eukaryotic No genes
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1A OHPLBJKB_03541
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1B No genes
Spermidine N1-acetyltransferase (EC 2.3.1.57) OHPLBJKB_02142
Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) OHPLBJKB_02273
  OHPLBJKB_02543
Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) OHPLBJKB_02272
  OHPLBJKB_02544
Spermidine synthase (EC 2.5.1.16) OHPLBJKB_03540
Transcriptional regulator of catabolic arginine decarboxylase (adiA) OHPLBJKB_03144
  OHPLBJKB_03928
Transcriptional regulator, MerR family, near polyamine transporter No genes
Transcriptional regulator, TetR family, associated with agmatine catabolism No genes
Transcriptional regulator, luxR family, associated with agmatine catabolism No genes

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