SEED Subsystem: DNA Repair Base Excision in Escherichia coli HS(pFamp)R (ATCC 700891)

Experiments:

Role Gene Name  
ATP-dependent DNA ligase (EC 6.5.1.1) No genes
ATP-dependent DNA ligase (EC 6.5.1.1) LigC No genes
ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD No genes
DNA ligase (EC 6.5.1.2) OHPLBJKB_01312
DNA polymerase I (EC 2.7.7.7) OHPLBJKB_00933
  OHPLBJKB_04189
DNA polymerase II (EC 2.7.7.7) OHPLBJKB_03598
DNA-3-methyladenine glycosylase (EC 3.2.2.20) OHPLBJKB_00157
DNA-3-methyladenine glycosylase II (EC 3.2.2.21) OHPLBJKB_01637
Endonuclease III (EC 4.2.99.18) OHPLBJKB_02093
Endonuclease VIII OHPLBJKB_03003
Exodeoxyribonuclease I (EC 3.1.11.1) OHPLBJKB_01689
Flap structure-specific endonuclease (EC 3.-.-.-) No genes
Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) OHPLBJKB_00067
Ku domain protein No genes
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) OHPLBJKB_00823
Single-stranded-DNA-specific exonuclease RecJ, clostridial paralog No genes
Single-stranded-DNA-specific exonuclease RecJ, cyanobacterial paralog No genes
Uracil-DNA glycosylase, family 1 OHPLBJKB_01126

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Or view this subsystem at the SEED (slow)