SEED Subsystem: Isoprenoid Biosynthesis in Escherichia coli ECRC99

Experiments:

Role Gene Name  
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) KEDOAH_17960 ispC
1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) KEDOAH_19545 dxs
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) KEDOAH_06500 ispG
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) KEDOAH_07670 ispF
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) KEDOAH_07675 ispD
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) KEDOAH_25430 ispE
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) KEDOAH_17190 ispH
Acetyl-CoA acetyltransferase (EC 2.3.1.9) No genes
Candidate gene for the hypothesized phosphomevalonate decarboxylase No genes
Dimethylallyltransferase (EC 2.5.1.1) No genes
Diphosphomevalonate decarboxylase (EC 4.1.1.33) No genes
Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) No genes
Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34) No genes
Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10) No genes
Isopentenyl phosphate kinase No genes
Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) KEDOAH_08545 idi
Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC 5.3.3.2) No genes
Mevalonate kinase (EC 2.7.1.36) No genes
Phosphomevalonate kinase (EC 2.7.4.2) No genes
Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) No genes

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