SEED Subsystem: LOS core oligosaccharide biosynthesis in Escherichia coli ECRC98

Experiments:

Role Gene Name  
3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-) No genes
ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) JDDGAC_19325 rfaD
ADP-heptose synthase (EC 2.7.-.-) JDDGAC_22370 hldE
ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) JDDGAC_19320 rfaF
Beta-1,3-glucosyltransferase No genes
Beta-1,4-galactosyltransferase JDDGAC_19345 waaH
D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase (EC 3.1.1.-) JDDGAC_13640 gmhB
D-glycero-beta-D-manno-heptose 7-phosphate kinase JDDGAC_22370 hldE
Heptosyltransferase family protein, lipopolysaccharide core biosynthesis No genes
Lipopolysaccharide 1,2-N-acetylglucosaminetransferase (EC 2.4.1.56) JDDGAC_19305 rfaB
Lipopolysaccharide 1,6-galactosyltransferase (EC 2.4.1.-) No genes
Lipopolysaccharide core biosynthesis glycosyltransferase, group 2 family protein (EC 2.4.1.-) No genes
Lipopolysaccharide core biosynthesis protein RfaS No genes
Lipopolysaccharide core biosynthesis protein RfaY JDDGAC_19295 rfaY
Lipopolysaccharide core biosynthesis protein RfaZ No genes
Lipopolysaccharide core biosynthesis protein WaaP (EC 2.7.-.-), heptosyl-I-kinase JDDGAC_19285 rfaP
Lipopolysaccharide heptosyltransferase I (EC 2.4.1.-) JDDGAC_19315 rfaC
Lipopolysaccharide heptosyltransferase III (EC 2.4.1.-) JDDGAC_19275 rfaQ
O-antigen ligase No genes
Phosphoheptose isomerase (EC 5.3.1.-) JDDGAC_21845 diaA
Phosphoheptose isomerase 1 (EC 5.3.1.-) JDDGAC_13400 lpcA
Phosphoheptose isomerase 2 (EC 5.3.1.-) No genes
Putative two-domain glycosyltransferase No genes
UDP-galactopyranose mutase (EC 5.4.99.9) No genes
UDP-galactose:(galactosyl) LPS alpha1,2-galactosyltransferase WaaW (EC 2.4.1.-) JDDGAC_19300 rfaJ
UDP-glucose:(glucosyl)lipopolysaccharide alpha-1,2-glucosyltransferase (EC 2.4.1.58) No genes
UDP-glucose:(glucosyl)lipopolysaccharide alpha-1,3-glucosyltransferase WaaO (EC 2.4.1.-) JDDGAC_19290 waaO
UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG (EC 2.4.1.-) JDDGAC_19280 rfaG

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