SEED Subsystem: Experimental tye in Escherichia coli ECRC98

Experiments:

Role Gene Name  
2H phosphoesterase superfamily protein Bsu1186 (yjcG) No genes
5-aminolevulinate synthase (EC 2.3.1.37) No genes
Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases, YtcI homolog No genes
Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) JDDGAC_26045 hemF
Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) JDDGAC_17745 hemN
Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22), divergent, putative No genes
Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22), divergent, putative 2 No genes
Cytochrome c-type biogenesis protein CcdA (DsbD analog) No genes
Cytochrome c-type biogenesis protein CcsA/ResC No genes
DUF1801 domain-containing protein No genes
Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) JDDGAC_11790 hemH
GNAT family acetyltransferase YjcF No genes
Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) JDDGAC_13895 hemL
Glutamyl-tRNA reductase (EC 1.2.1.70) JDDGAC_06130 hemA
HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase No genes
Homolog of E. coli HemY protein No genes
Hypothetical membrane protein, possible involvement in cytochrome functioning/assembly No genes
Hypothetical protein Q, similar to Chlorite dismutase No genes
Hypothetical protein SAV1831 No genes
Hypothetical protein SAV1869 No genes
Hypothetical protein, ydbS homolog No genes
Hypothetical protein, ydbT homolog No genes
Hypothetical, related to broad specificity phosphatases COG0406 No genes
Methyltransferase (EC 2.1.1.-) colocalized with Q No genes
Periplasmic/membrane protein associated with DUF414 No genes
Porphobilinogen deaminase (EC 2.5.1.61) JDDGAC_18075 hemC
Porphobilinogen synthase (EC 4.2.1.24) JDDGAC_12335 hemB
Possibly related to ydbT No genes
Precorrin-2 oxidase (EC 1.3.1.76) JDDGAC_20810 cysG
Protein of unknown function DUF414 JDDGAC_17750 yihI
Protoporphyrinogen IX oxidase, aerobic (EC 1.3.3.4) No genes
Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) JDDGAC_17850 hemG
Putative acetyl esterase YjcH (EC 3.1.1.-) No genes
Putative lipoprotein SAV1865 No genes
Putative membrane protein Q2 colocalized with Q No genes
Putative nitroreductase family protein SACOL0874 No genes
Putative oxidoreductase ferredoxin-type protein, clusters with CPO No genes
Ribonuclease D (EC 3.1.26.3) JDDGAC_01180 rnd
Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) No genes
Sirohydrochlorin ferrochelatase (EC 4.99.1.4) JDDGAC_20810 cysG
Small hypothetical protein Hyp1 No genes
Sua5 YciO YrdC YwlC family protein No genes
Uncharacterized SAV1743 homolog No genes
Uncharacterized protein Q1 colocalized with Q No genes
Uncharacterized protein UPF0344 No genes
Uncharacterized protein, homolog of B.subtilis yhgC No genes
Uroporphyrinogen III decarboxylase (EC 4.1.1.37) JDDGAC_16985 hemE
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) JDDGAC_20810 cysG
Uroporphyrinogen-III synthase (EC 4.2.1.75) JDDGAC_18080 hemD
Uroporphyrinogen-III synthase, divergent, Flavobacterial type (EC 4.2.1.75) No genes
Uroporphyrinogen-III synthase, divergent, Francisella type (EC 4.2.1.75) No genes
transmembrane protein, distant homology with ydbS No genes
transmembrane protein, distant homology with ydbT No genes

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