SEED Subsystem: Nitrate and nitrite ammonification in Escherichia coli ECRC100

Experiments:

Role Gene Name  
Assimilatory nitrate reductase large subunit (EC:1.7.99.4) No genes
Cytochrome c nitrite reductase, small subunit NrfH No genes
Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly OKFHMN_12800 nrfF
Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly OKFHMN_12795 nrfF
Cytochrome c-type heme lyase subunit nrfG, nitrite reductase complex assembly OKFHMN_12790 nrfG
Cytochrome c-type protein NapC OKFHMN_23275 napC
Cytochrome c-type protein NrfB precursor OKFHMN_12815 nrfB
Cytochrome c552 precursor (EC 1.7.2.2) OKFHMN_12820 nrfA
Ferredoxin--nitrite reductase (EC 1.7.7.1) No genes
Ferredoxin-type protein NapF (periplasmic nitrate reductase) OKFHMN_23245 napF
Ferredoxin-type protein NapG (periplasmic nitrate reductase) OKFHMN_23260 napG
Nitrate ABC transporter, ATP-binding protein No genes
Nitrate ABC transporter, nitrate-binding protein No genes
Nitrate ABC transporter, permease protein No genes
Nitrate reductase cytochrome c550-type subunit OKFHMN_23270 napH
Nitrate/nitrite response regulator protein OKFHMN_23320 narP
Nitrate/nitrite sensor protein (EC 2.7.3.-) OKFHMN_21975 narQ
  OKFHMN_28525 narX
Nitrate/nitrite transporter No genes
Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) OKFHMN_17195 nirB
Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) OKFHMN_17190 nirD
Nitrite reductase probable [NAD(P)H] subunit (EC 1.7.1.4) No genes
Nitrite reductase probable electron transfer 4Fe-S subunit (EC 1.7.1.4) No genes
Nitrite transporter NirC OKFHMN_17185 nirC
Nitrite transporter from formate/nitrite family No genes
NrfC protein OKFHMN_12810 nrfC
NrfD protein OKFHMN_12805 nrfD
Periplasmic nitrate reductase component NapD OKFHMN_23250 napD
Periplasmic nitrate reductase component NapE No genes
Periplasmic nitrate reductase component NapL No genes
Periplasmic nitrate reductase precursor (EC 1.7.99.4) OKFHMN_23255 napA
Polyferredoxin NapH (periplasmic nitrate reductase) OKFHMN_23265 napH
Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly No genes
Respiratory nitrate reductase alpha chain (EC 1.7.99.4) OKFHMN_01420 narZ
  OKFHMN_28540 narG
Respiratory nitrate reductase beta chain (EC 1.7.99.4) OKFHMN_01425 narH
  OKFHMN_28545 narH
Respiratory nitrate reductase delta chain (EC 1.7.99.4) OKFHMN_01430 narW
  OKFHMN_28550 narJ
Respiratory nitrate reductase gamma chain (EC 1.7.99.4) OKFHMN_01435 narI
  OKFHMN_28555 narI
Respiratory nitrate reductase subunit, conjectural (EC 1.7.99.4) No genes
Response regulator NasT No genes

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