SEED Subsystem: Choline and Betaine Uptake and Betaine Biosynthesis in Escherichia coli ECRC100

Experiments:

Role Gene Name  
Alcohol dehydrogenase GbsB (type III ), essential for the utilization of choline (EC 1.1.1.1) No genes
Betaine aldehyde dehydrogenase (EC 1.2.1.8) OKFHMN_09045 betB
Choline ABC transport system, ATP-binding protein OpuBA No genes
Choline ABC transport system, choline-binding protein OpuBC No genes
Choline ABC transport system, permease protein OpuBB No genes
Choline ABC transport system, permease protein OpuBD No genes
Choline binding protein A No genes
Choline binding protein D No genes
Choline dehydrogenase (EC 1.1.99.1) OKFHMN_09050 betA
Choline-sulfatase (EC 3.1.6.6) OKFHMN_05920 aslA
  OKFHMN_15110 yidJ
GbcA Glycine betaine demethylase subunit A No genes
GbcB Glycine betaine demethylase subunit B No genes
Glycine betaine ABC transport system permease protein No genes
Glycine betaine ABC transport system, ATP-binding protein OpuAA (EC 3.6.3.32) No genes
Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC No genes
Glycine betaine ABC transport system, permease protein OpuAB No genes
Glycine betaine ABC transport system, permease/glycine betaine-binding protein OpuABC No genes
Glycine betaine transporter OpuD No genes
Glycine betaine/L-proline ABC transporter, glycine betaine/L-proline- binding/permease protein No genes
HTH-type transcriptional regulator BetI OKFHMN_09040 betI
High-affinity choline uptake protein BetT OKFHMN_09035 betT
L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) OKFHMN_20820 proV
L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) OKFHMN_20815 proW
L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) No genes
Osmotically activated L-carnitine/choline ABC transporter, ATP-binding protein OpuCA No genes
Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB No genes
Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCD No genes
Osmotically activated L-carnitine/choline ABC transporter, substrate-binding protein OpuCC No genes
Sarcosine oxidase alpha subunit (EC 1.5.3.1) No genes
Sarcosine oxidase beta subunit (EC 1.5.3.1) No genes
Sarcosine oxidase delta subunit (EC 1.5.3.1) No genes
Sarcosine oxidase gamma subunit (EC 1.5.3.1) No genes

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