SEED Subsystem: Polyamine Metabolism in Escherichia coli ECOR38

Experiments:

Role Gene Name  
4-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) HEPCGN_26255 patD
5'-methylthioadenosine nucleosidase (EC 3.2.2.16) No genes
ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) HEPCGN_24060 potD
  HEPCGN_26235 potD
Agmatinase (EC 3.5.3.11) HEPCGN_18620 speB
Agmatine deiminase (EC 3.5.3.12) No genes
Agmatine/putrescine antiporter, associated with agmatine catabolism No genes
Arginine decarboxylase (EC 4.1.1.19) No genes
Arginine decarboxylase, catabolic (EC 4.1.1.19) HEPCGN_11185 adiA
Arginine/agmatine antiporter HEPCGN_11195 adiC
Arginine/ornithine antiporter No genes
Arginine/ornithine antiporter ArcD HEPCGN_06055 ydgI
  HEPCGN_10050 yfcC
Biosynthetic arginine decarboxylase (EC 4.1.1.19) HEPCGN_18610 speA
Carbamate kinase (EC 2.7.2.2) HEPCGN_06490 arcC
  HEPCGN_07550 yahI
  HEPCGN_10040 arcC
Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-) No genes
Carboxynorspermidine dehydrogenase, putative (EC 1.1.1.-) No genes
DNA-binding response regulator, LuxR family, near polyamine transporter No genes
N-carbamoylputrescine amidase (3.5.1.53) No genes
Ornithine decarboxylase (EC 4.1.1.17) HEPCGN_01145 speF
  HEPCGN_18450 speC
Predicted chaperone lipoprotein YacC, potentially involved in protein secretion HEPCGN_08440 yacC
Predicted polyamine sensor NspS, involved in biofilm formation No genes
Probable spermidine/putrescine substrate binding protein in Mollicutes No genes
Probable two-component sensor, near polyamine transporter No genes
Putative GntR-family regulatory protein and aminotransferase near polyamine transporter No genes
Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) HEPCGN_02070 potF
Putrescine carbamoyltransferase (EC 2.1.3.6) No genes
Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) HEPCGN_24075 potA
  HEPCGN_26240
Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) HEPCGN_02075 potG
Putrescine transport system permease protein PotH (TC 3.A.1.11.2) HEPCGN_02080 potH
Putrescine transport system permease protein PotI (TC 3.A.1.11.2) HEPCGN_02085 potI
Putrescine-ornithine antiporter No genes
Putrescine/proton symporter, putrescine/ornithine antiporter PotE HEPCGN_01140 potE
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), eukaryotic No genes
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1A HEPCGN_08450 speD
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1B No genes
Spermidine N1-acetyltransferase (EC 2.3.1.57) HEPCGN_06170 speG
Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) HEPCGN_24070 potB
  HEPCGN_26245 potB
Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) HEPCGN_24065 potC
  HEPCGN_26250 ydcV
Spermidine synthase (EC 2.5.1.16) HEPCGN_08445 speE
Transcriptional regulator of catabolic arginine decarboxylase (adiA) HEPCGN_00555 envY
  HEPCGN_11190 adiY
Transcriptional regulator, MerR family, near polyamine transporter No genes
Transcriptional regulator, TetR family, associated with agmatine catabolism No genes
Transcriptional regulator, luxR family, associated with agmatine catabolism No genes

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