SEED Subsystem: Polyamine Metabolism in Escherichia coli ECOR27

Experiments:

Role Gene Name  
4-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) NOLOHH_19230 patD
5'-methylthioadenosine nucleosidase (EC 3.2.2.16) No genes
ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) NOLOHH_19250 ydcS
  NOLOHH_20950 potD
Agmatinase (EC 3.5.3.11) NOLOHH_11185 speB
Agmatine deiminase (EC 3.5.3.12) No genes
Agmatine/putrescine antiporter, associated with agmatine catabolism No genes
Arginine decarboxylase (EC 4.1.1.19) No genes
Arginine decarboxylase, catabolic (EC 4.1.1.19) NOLOHH_04815 adiA
Arginine/agmatine antiporter NOLOHH_04825 adiC
Arginine/ornithine antiporter No genes
Arginine/ornithine antiporter ArcD NOLOHH_18185 ydgI
Biosynthetic arginine decarboxylase (EC 4.1.1.19) NOLOHH_11175 speA
Carbamate kinase (EC 2.7.2.2) NOLOHH_00835 arcC
  NOLOHH_01840 yahI
Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-) No genes
Carboxynorspermidine dehydrogenase, putative (EC 1.1.1.-) No genes
DNA-binding response regulator, LuxR family, near polyamine transporter No genes
N-carbamoylputrescine amidase (3.5.1.53) No genes
Ornithine decarboxylase (EC 4.1.1.17) NOLOHH_11040 speC
  NOLOHH_23470 speF
Predicted chaperone lipoprotein YacC, potentially involved in protein secretion NOLOHH_02805 yacC
Predicted polyamine sensor NspS, involved in biofilm formation No genes
Probable spermidine/putrescine substrate binding protein in Mollicutes No genes
Probable two-component sensor, near polyamine transporter No genes
Putative GntR-family regulatory protein and aminotransferase near polyamine transporter No genes
Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) NOLOHH_22330 potF
Putrescine carbamoyltransferase (EC 2.1.3.6) No genes
Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) NOLOHH_19245
  NOLOHH_20935 potA
Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) NOLOHH_22325 potG
Putrescine transport system permease protein PotH (TC 3.A.1.11.2) NOLOHH_22320 potH
Putrescine transport system permease protein PotI (TC 3.A.1.11.2) NOLOHH_22315 potI
Putrescine-ornithine antiporter No genes
Putrescine/proton symporter, putrescine/ornithine antiporter PotE NOLOHH_23475 potE
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), eukaryotic No genes
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1A NOLOHH_02815 speD
  NOLOHH_24555 speD
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1B No genes
Spermidine N1-acetyltransferase (EC 2.3.1.57) NOLOHH_18295 speG
Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) NOLOHH_19240 potB
  NOLOHH_20940 potB
Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) NOLOHH_19235 ydcV
  NOLOHH_20945 potC
Spermidine synthase (EC 2.5.1.16) NOLOHH_02810 speE
  NOLOHH_24550
Transcriptional regulator of catabolic arginine decarboxylase (adiA) NOLOHH_04820 adiY
  NOLOHH_24155 envY
  NOLOHH_24450 hilD
Transcriptional regulator, MerR family, near polyamine transporter No genes
Transcriptional regulator, TetR family, associated with agmatine catabolism No genes
Transcriptional regulator, luxR family, associated with agmatine catabolism No genes

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