SEED Subsystem: Nitrate and nitrite ammonification in Escherichia coli ECOR27

Experiments:

Role Gene Name  
Assimilatory nitrate reductase large subunit (EC:1.7.99.4) No genes
Cytochrome c nitrite reductase, small subunit NrfH No genes
Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly NOLOHH_05050 nrfF
Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly No genes
Cytochrome c-type heme lyase subunit nrfG, nitrite reductase complex assembly NOLOHH_05040 nrfG
Cytochrome c-type protein NapC NOLOHH_14850 napC
Cytochrome c-type protein NrfB precursor NOLOHH_05065 nrfB
Cytochrome c552 precursor (EC 1.7.2.2) NOLOHH_05070 nrfA
Ferredoxin--nitrite reductase (EC 1.7.7.1) No genes
Ferredoxin-type protein NapF (periplasmic nitrate reductase) NOLOHH_14820 napF
Ferredoxin-type protein NapG (periplasmic nitrate reductase) NOLOHH_14835 napG
Nitrate ABC transporter, ATP-binding protein No genes
Nitrate ABC transporter, nitrate-binding protein No genes
Nitrate ABC transporter, permease protein No genes
Nitrate reductase cytochrome c550-type subunit NOLOHH_14845 napB
Nitrate/nitrite response regulator protein NOLOHH_14895 narP
Nitrate/nitrite sensor protein (EC 2.7.3.-) NOLOHH_13655 narQ
  NOLOHH_20530 narX
Nitrate/nitrite transporter No genes
Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) NOLOHH_08995 nirB
Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) NOLOHH_08990 nirD
Nitrite reductase probable [NAD(P)H] subunit (EC 1.7.1.4) No genes
Nitrite reductase probable electron transfer 4Fe-S subunit (EC 1.7.1.4) No genes
Nitrite transporter NirC NOLOHH_08985 nirC
Nitrite transporter from formate/nitrite family No genes
NrfC protein NOLOHH_05060 nrfC
NrfD protein NOLOHH_05055 nrfD
Periplasmic nitrate reductase component NapD NOLOHH_14825 napD
Periplasmic nitrate reductase component NapE No genes
Periplasmic nitrate reductase component NapL No genes
Periplasmic nitrate reductase precursor (EC 1.7.99.4) NOLOHH_14830 napA
Polyferredoxin NapH (periplasmic nitrate reductase) NOLOHH_14840 napH
Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly No genes
Respiratory nitrate reductase alpha chain (EC 1.7.99.4) NOLOHH_19085 narZ
  NOLOHH_20515 narG
Respiratory nitrate reductase beta chain (EC 1.7.99.4) NOLOHH_19090 narH
  NOLOHH_20510 narH
Respiratory nitrate reductase delta chain (EC 1.7.99.4) NOLOHH_19095 narW
  NOLOHH_20505 narJ
Respiratory nitrate reductase gamma chain (EC 1.7.99.4) NOLOHH_19100 narI
  NOLOHH_20500 narI
Respiratory nitrate reductase subunit, conjectural (EC 1.7.99.4) No genes
Response regulator NasT No genes

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