SEED Subsystem: Isoprenoid Biosynthesis in Escherichia coli ECOR27

Experiments:

Role Gene Name  
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) NOLOHH_02540 ispC
1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) NOLOHH_01370 dxs
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) NOLOHH_13370 ispG
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) NOLOHH_12285 ispF
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) NOLOHH_12280 ispD
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) NOLOHH_20625 ispE
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) NOLOHH_03295 ispH
Acetyl-CoA acetyltransferase (EC 2.3.1.9) No genes
Candidate gene for the hypothesized phosphomevalonate decarboxylase No genes
Dimethylallyltransferase (EC 2.5.1.1) No genes
Diphosphomevalonate decarboxylase (EC 4.1.1.33) No genes
Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) No genes
Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34) No genes
Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10) No genes
Isopentenyl phosphate kinase No genes
Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) NOLOHH_11520 idi
Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC 5.3.3.2) No genes
Mevalonate kinase (EC 2.7.1.36) No genes
Phosphomevalonate kinase (EC 2.7.4.2) No genes
Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) No genes

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