SEED Subsystem: Nitrate and nitrite ammonification in Dickeya dianthicola 67-19

Experiments:

Role Gene Name  
Assimilatory nitrate reductase large subunit (EC:1.7.99.4) HGI48_RS14085
Cytochrome c nitrite reductase, small subunit NrfH No genes
Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly No genes
Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly No genes
Cytochrome c-type heme lyase subunit nrfG, nitrite reductase complex assembly No genes
Cytochrome c-type protein NapC No genes
Cytochrome c-type protein NrfB precursor No genes
Cytochrome c552 precursor (EC 1.7.2.2) No genes
Ferredoxin--nitrite reductase (EC 1.7.7.1) No genes
Ferredoxin-type protein NapF (periplasmic nitrate reductase) No genes
Ferredoxin-type protein NapG (periplasmic nitrate reductase) No genes
Nitrate ABC transporter, ATP-binding protein HGI48_RS14095
  HGI48_RS18605
Nitrate ABC transporter, nitrate-binding protein HGI48_RS14105
Nitrate ABC transporter, permease protein No genes
Nitrate reductase cytochrome c550-type subunit No genes
Nitrate/nitrite response regulator protein HGI48_RS12040
Nitrate/nitrite sensor protein (EC 2.7.3.-) HGI48_RS11710
  HGI48_RS12035
Nitrate/nitrite transporter HGI48_RS12030
  HGI48_RS14145
  HGI48_RS20685
Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) HGI48_RS14090
Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) No genes
Nitrite reductase probable [NAD(P)H] subunit (EC 1.7.1.4) No genes
Nitrite reductase probable electron transfer 4Fe-S subunit (EC 1.7.1.4) No genes
Nitrite transporter NirC No genes
Nitrite transporter from formate/nitrite family No genes
NrfC protein HGI48_RS04545
NrfD protein HGI48_RS04540
Periplasmic nitrate reductase component NapD No genes
Periplasmic nitrate reductase component NapE No genes
Periplasmic nitrate reductase component NapL No genes
Periplasmic nitrate reductase precursor (EC 1.7.99.4) No genes
Polyferredoxin NapH (periplasmic nitrate reductase) No genes
Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly No genes
Respiratory nitrate reductase alpha chain (EC 1.7.99.4) HGI48_RS12015
Respiratory nitrate reductase beta chain (EC 1.7.99.4) HGI48_RS12010
Respiratory nitrate reductase delta chain (EC 1.7.99.4) HGI48_RS12005
Respiratory nitrate reductase gamma chain (EC 1.7.99.4) HGI48_RS12000
Respiratory nitrate reductase subunit, conjectural (EC 1.7.99.4) No genes
Response regulator NasT HGI48_RS14110

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