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SEED Subsystem: Conjugative transposon, Bacteroidales in
Echinicola vietnamensis KMM 6221, DSM 17526
Experiments:
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Role
Gene
Name
Conjugative transposon protein TraA
Echvi
_3228
Conjugative transposon protein TraB
Echvi
_3227
Conjugative transposon protein TraC
No genes
Conjugative transposon protein TraD
Echvi
_3226
Conjugative transposon protein TraE
Echvi
_1365
Echvi
_1950
Echvi
_3184
Echvi
_4365
Conjugative transposon protein TraF
Echvi
_3183
Conjugative transposon protein TraG
Echvi
_1362
Echvi
_1947
Echvi
_3182
Echvi
_4100
Echvi
_4363
Conjugative transposon protein TraH
No genes
Conjugative transposon protein TraI
Echvi
_1361
Echvi
_1946
Echvi
_3181
Echvi
_4360
Echvi
_4362
Conjugative transposon protein TraJ
Echvi
_1358
Echvi
_1943
Echvi
_3180
Echvi
_4096
Echvi
_4359
Conjugative transposon protein TraK
Echvi
_1357
Echvi
_1942
Echvi
_3179
Echvi
_4095
Echvi
_4358
Conjugative transposon protein TraL
No genes
Conjugative transposon protein TraM
Echvi
_1355
Echvi
_1940
Echvi
_3176
Echvi
_4093
Echvi
_4357
Conjugative transposon protein TraN
Echvi
_3175
Conjugative transposon protein TraO
Echvi
_3174
Conjugative transposon protein TraP
No genes
Conjugative transposon protein TraQ
Echvi
_3173
Putative conjugative transposon mobilization protein BF0132
Echvi
_1384
Echvi
_1978
Echvi
_3230
Echvi
_4102
Putative mobilization protein BF0133
Echvi
_1383
Echvi
_1977
Echvi
_3231
Echvi
_4101
Echvi
_4381
hypothetical protein clusted with conjugative transposons, BF0131
Echvi
_3229
Or select organism:
Acidovorax sp. GW101-3H11
Acinetobacter baumannii LAC-4
Acinetobacter radioresistens SK82
Agrobacterium fabrum C58
Alteromonas macleodii MIT1002
Azospirillum brasilense Sp245
Azospirillum sp. SherDot2
Bacteroides ovatus ATCC 8483
Bacteroides stercoris CC31F
Bacteroides thetaiotaomicron VPI-5482
Bifidobacterium breve UCC2003
Bosea sp. OAE506
Brevundimonas sp. GW460-12-10-14-LB2
Burkholderia phytofirmans PsJN
Castellaniella sp019104865 MT123
Caulobacter crescentus NA1000
Caulobacter crescentus NA1000 Δfur
Cellulophaga baltica 18
Cupriavidus basilensis FW507-4G11
Dechlorosoma suillum PS
Desulfovibrio vulgaris Hildenborough JW710
Desulfovibrio vulgaris Miyazaki F
Dickeya dadantii 3937
Dickeya dianthicola 67-19
Dickeya dianthicola ME23
Dinoroseobacter shibae DFL-12
Dyella japonica UNC79MFTsu3.2
Echinicola vietnamensis KMM 6221, DSM 17526
Enterobacter asburiae PDN3
Enterobacter sp. TBS_079
Erwinia amylovora T8
Erwinia tracheiphila HP pepo 2.2
Erwinia tracheiphila SCR3
Escherichia coli BL21
Escherichia coli BW25113
Escherichia coli ECOR27
Escherichia coli ECOR38
Escherichia coli ECRC100
Escherichia coli ECRC101
Escherichia coli ECRC102
Escherichia coli ECRC62
Escherichia coli ECRC98
Escherichia coli ECRC99
Escherichia coli HS(pFamp)R (ATCC 700891)
Escherichia coli Nissle 1917
Escherichia fergusonii Becca
Fusobacterium nucleatum SB010
Herbaspirillum seropedicae SmR1
Hydrogenophaga sp. GW460-11-11-14-LB1
Kangiella aquimarina DSM 16071
Klebsiella michiganensis M5al
Klebsiella pneumoniae MKP103
Klebsiella pneumoniae MRSN742743
Lysobacter sp. OAE881
Magnetospirillum magneticum AMB-1
Marinobacter adhaerens HP15
Methanococcus maripaludis JJ
Methanococcus maripaludis S2
Methylophilus sp. DMC18
Mucilaginibacter yixingensis YX-36 DSM 26809
Mycobacterium tuberculosis H37Rv
Pantoea agglomerans CFBP13505 P0401
Pantoea sp. MT58
Parabacteroides merdae CL09T00C40
Paraburkholderia bryophila 376MFSha3.1
Paraburkholderia graminis OAS925
Paraburkholderia sabiae LMG 24235
Pectobacterium carotovorum WPP14
Pedobacter sp. GW460-11-11-14-LB5
Phaeobacter inhibens DSM 17395
Phocaeicola dorei CL03T12C01
Phocaeicola vulgatus CL09T03C04
Pontibacter actiniarum KMM 6156, DSM 19842
Pseudomonas aeruginosa MRSN321
Pseudomonas aeruginosa PA14
Pseudomonas aeruginosa PUPa3
Pseudomonas fluorescens FW300-N1B4
Pseudomonas fluorescens FW300-N2C3
Pseudomonas fluorescens FW300-N2E2
Pseudomonas fluorescens FW300-N2E3
Pseudomonas fluorescens GW456-L13
Pseudomonas fluorescens SBW25
Pseudomonas fluorescens SBW25-INTG
Pseudomonas lactucae CFBP13502
Pseudomonas orientalis W4I3
Pseudomonas putida KT2440
Pseudomonas segetis P6
Pseudomonas simiae WCS417
Pseudomonas sp. BP01
Pseudomonas sp. DMC3
Pseudomonas sp. RS175
Pseudomonas sp. S08-1
Pseudomonas sp. SVBP6
Pseudomonas stutzeri RCH2
Pseudomonas syringae pv. syringae B728a
Pseudomonas syringae pv. syringae B728a ΔmexB
Rahnella sp. WP5
Ralstonia solanacearum GMI1000
Ralstonia solanacearum IBSBF1503
Ralstonia solanacearum PSI07
Ralstonia solanacearum UW163
Ralstonia sp. UNC404CL21Col
Rhizobium sp. OAE497
Rhodanobacter denitrificans FW104-10B01
Rhodanobacter denitrificans MT42
Rhodanobacter sp. FW510-T8
Rhodanobacter sp000427505 FW510-R12
Rhodopseudomonas palustris CGA009
Rhodospirillum rubrum S1H
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
Serratia liquefaciens MT49
Shewanella amazonensis SB2B
Shewanella loihica PV-4
Shewanella oneidensis MR-1
Shewanella sp. ANA-3
Sinorhizobium meliloti 1021
Sphingobium sp. HT1-2
Sphingomonas koreensis DSMZ 15582
Synechococcus elongatus PCC 7942
Synechocystis sp000284455 PCC 6803
Variovorax sp. OAS795
Variovorax sp. SCN45
Vibrio cholerae E7946 ATCC 55056
Xanthobacter sp. DMC5
Xanthomonas campestris pv. campestris strain 8004
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