SEED Subsystem: DNA Repair Base Excision in Cellulophaga baltica 18

Experiments:

Role Gene Name  
ATP-dependent DNA ligase (EC 6.5.1.1) No genes
ATP-dependent DNA ligase (EC 6.5.1.1) LigC M666_RS06765
ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD No genes
DNA ligase (EC 6.5.1.2) M666_RS17735
DNA polymerase I (EC 2.7.7.7) M666_RS07555
DNA polymerase II (EC 2.7.7.7) No genes
DNA-3-methyladenine glycosylase (EC 3.2.2.20) M666_RS03105
DNA-3-methyladenine glycosylase II (EC 3.2.2.21) No genes
Endonuclease III (EC 4.2.99.18) M666_RS13940
Endonuclease VIII No genes
Exodeoxyribonuclease I (EC 3.1.11.1) No genes
Flap structure-specific endonuclease (EC 3.-.-.-) No genes
Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) No genes
Ku domain protein No genes
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) M666_RS04300
Single-stranded-DNA-specific exonuclease RecJ, clostridial paralog No genes
Single-stranded-DNA-specific exonuclease RecJ, cyanobacterial paralog No genes
Uracil-DNA glycosylase, family 1 M666_RS15630

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