SEED Subsystem: DNA-replication in Bacteroides stercoris CC31F

Experiments:

Role Gene Name  
ATP-dependent DNA helicase RecG (EC 3.6.1.-) HMPREF1181_RS06615
ATP-dependent DNA helicase RecQ HMPREF1181_RS00685
  HMPREF1181_RS07440
  HMPREF1181_RS11875
  HMPREF1181_RS14110
Arrested fork binding No genes
Chromosomal replication initiator protein DnaA HMPREF1181_RS08655
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) HMPREF1181_RS05370
DNA polymerase I (EC 2.7.7.7) HMPREF1181_RS02070
  HMPREF1181_RS17185
DNA polymerase II (EC 2.7.7.7) No genes
DNA polymerase III alpha subunit (EC 2.7.7.7) HMPREF1181_RS09365
DNA polymerase III beta subunit (EC 2.7.7.7) HMPREF1181_RS07350
  HMPREF1181_RS10915
DNA polymerase III chi subunit (EC 2.7.7.7) No genes
DNA polymerase III delta prime subunit (EC 2.7.7.7) HMPREF1181_RS00125
DNA polymerase III delta subunit (EC 2.7.7.7) HMPREF1181_RS14195
DNA polymerase III epsilon subunit (EC 2.7.7.7) HMPREF1181_RS01015
DNA polymerase III psi subunit (EC 2.7.7.7) No genes
DNA polymerase III subunits gamma and tau (EC 2.7.7.7) HMPREF1181_RS03790
DNA polymerase III theta subunit (EC 2.7.7.7) No genes
DNA primase (EC 2.7.7.-) HMPREF1181_RS00765
  HMPREF1181_RS06580
  HMPREF1181_RS07695
  HMPREF1181_RS12205
  HMPREF1181_RS15735
DNA primase (EC 2.7.7.-), phage-associated No genes
DNA primase TraC (EC 2.7.7.-) No genes
DNA repair protein RecN HMPREF1181_RS10900
DNA replication protein DnaC No genes
DNA replication terminus site-binding protein No genes
Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) No genes
Exodeoxyribonuclease V beta chain (EC 3.1.11.5) No genes
Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) No genes
Helicase PriA essential for oriC/DnaA-independent DNA replication HMPREF1181_RS00670
Helicase loader DnaI No genes
Holliday junction DNA helicase RuvA HMPREF1181_RS07915
Holliday junction DNA helicase RuvB HMPREF1181_RS02130
Primosomal protein I HMPREF1181_RS07335
Primosomal replication protein N No genes
Primosomal replication protein N prime prime No genes
RecA protein HMPREF1181_RS11910
Recombination protein RecR HMPREF1181_RS16455
Replicative DNA helicase (EC 3.6.1.-) HMPREF1181_RS07540
  HMPREF1181_RS10970
  HMPREF1181_RS16265
Replicative DNA helicase (EC 3.6.1.-) [SA14-24] No genes
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) HMPREF1181_RS06545
Transcription-repair coupling factor HMPREF1181_RS04640

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