SEED Subsystem: DNA Repair Base Excision in Brevundimonas sp. GW460-12-10-14-LB2

Experiments:

Role Gene Name  
ATP-dependent DNA ligase (EC 6.5.1.1) No genes
ATP-dependent DNA ligase (EC 6.5.1.1) LigC A4249_RS04120
ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD A4249_RS10580
DNA ligase (EC 6.5.1.2) A4249_RS07250
DNA polymerase I (EC 2.7.7.7) A4249_RS13840
DNA polymerase II (EC 2.7.7.7) No genes
DNA-3-methyladenine glycosylase (EC 3.2.2.20) A4249_RS09505
DNA-3-methyladenine glycosylase II (EC 3.2.2.21) No genes
Endonuclease III (EC 4.2.99.18) A4249_RS15000
Endonuclease VIII No genes
Exodeoxyribonuclease I (EC 3.1.11.1) No genes
Flap structure-specific endonuclease (EC 3.-.-.-) No genes
Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) A4249_RS14505
Ku domain protein A4249_RS10575
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) A4249_RS05895
Single-stranded-DNA-specific exonuclease RecJ, clostridial paralog No genes
Single-stranded-DNA-specific exonuclease RecJ, cyanobacterial paralog No genes
Uracil-DNA glycosylase, family 1 No genes

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