SEED Subsystem: DNA Repair Base Excision in Bacteroides ovatus ATCC 8483

Experiments:

Role Gene Name  
ATP-dependent DNA ligase (EC 6.5.1.1) No genes
ATP-dependent DNA ligase (EC 6.5.1.1) LigC No genes
ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD BACOVA_04131
DNA ligase (EC 6.5.1.2) BACOVA_01568
  BACOVA_02616
DNA polymerase I (EC 2.7.7.7) BACOVA_01357
DNA polymerase II (EC 2.7.7.7) No genes
DNA-3-methyladenine glycosylase (EC 3.2.2.20) No genes
DNA-3-methyladenine glycosylase II (EC 3.2.2.21) No genes
Endonuclease III (EC 4.2.99.18) BACOVA_04414
Endonuclease VIII No genes
Exodeoxyribonuclease I (EC 3.1.11.1) No genes
Flap structure-specific endonuclease (EC 3.-.-.-) No genes
Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) No genes
Ku domain protein No genes
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) BACOVA_01165
Single-stranded-DNA-specific exonuclease RecJ, clostridial paralog No genes
Single-stranded-DNA-specific exonuclease RecJ, cyanobacterial paralog No genes
Uracil-DNA glycosylase, family 1 BACOVA_01525
  BACOVA_03224

Or select organism:

Or view this subsystem at the SEED (slow)