SEED Subsystem: DNA Repair Base Excision in Bosea sp. OAE506

Experiments:

Role Gene Name  
ATP-dependent DNA ligase (EC 6.5.1.1) No genes
ATP-dependent DNA ligase (EC 6.5.1.1) LigC ABIE41_RS24090
ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD ABIE41_RS04575
  ABIE41_RS06590
  ABIE41_RS06605
DNA ligase (EC 6.5.1.2) ABIE41_RS12670
DNA polymerase I (EC 2.7.7.7) ABIE41_RS03570
DNA polymerase II (EC 2.7.7.7) No genes
DNA-3-methyladenine glycosylase (EC 3.2.2.20) ABIE41_RS09690
DNA-3-methyladenine glycosylase II (EC 3.2.2.21) ABIE41_RS01240
  ABIE41_RS05030
Endonuclease III (EC 4.2.99.18) ABIE41_RS03410
Endonuclease VIII No genes
Exodeoxyribonuclease I (EC 3.1.11.1) No genes
Flap structure-specific endonuclease (EC 3.-.-.-) No genes
Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) ABIE41_RS04205
Ku domain protein ABIE41_RS04580
  ABIE41_RS06610
  ABIE41_RS06615
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) ABIE41_RS19130
Single-stranded-DNA-specific exonuclease RecJ, clostridial paralog No genes
Single-stranded-DNA-specific exonuclease RecJ, cyanobacterial paralog No genes
Uracil-DNA glycosylase, family 1 ABIE41_RS05980

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