SEED Subsystem: TCA Cycle in Escherichia coli BL21

Experiments:

Role Gene Name  
2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) ECD_00685
Aconitate hydratase (EC 4.2.1.3) No genes
Aconitate hydratase 2 (EC 4.2.1.3) No genes
Aconitate hydratase X, predicted No genes
Aconitate hydratase large subunit (EC 4.2.1.3) No genes
Aconitate hydratase small subunit (EC 4.2.1.3) No genes
Archaeal succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) No genes
Archaeal succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) No genes
Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) ECD_00585
Citrate synthase (si) (EC 2.3.3.1) ECD_00680
Dihydrolipoamide dehydrogenase (EC 1.8.1.4) No genes
Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) No genes
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) No genes
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) ECD_00686
Fumarate hydratase class I (EC 4.2.1.2) No genes
Fumarate hydratase class I, aerobic (EC 4.2.1.2) ECD_01581
Fumarate hydratase class II (EC 4.2.1.2) ECD_01580
Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) ECD_01134
Isocitrate dehydrogenase [NAD] (EC 1.1.1.41) No genes
Malate dehydrogenase (EC 1.1.1.37) ECD_00768
  ECD_03096
Malate:quinone oxidoreductase (EC 1.1.5.4) ECD_02137
Putative Dihydrolipoamide dehydrogenase (EC 1.8.1.4) No genes
Putative malate dehydrogenase (EC 1.1.1.37), similar to archaeal MJ1425 No genes
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) ECD_00683
  ECD_04026
  ECD_04072
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) ECD_00684
  ECD_04025
Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) ECD_00688
Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) ECD_00687
Transcriptional regulator of succinyl CoA synthetase operon No genes
hypothetical protein that often co-occurs with aconitase No genes

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